Gene Information

Name : Sinme_6479 (Sinme_6479)
Accession : YP_004552048.1
Strain :
Genome accession: NC_015591
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1197950 - 1198750 bp
Length : 801 bp
Strand : +
Note : PFAM: Integrase, catalytic core; KEGG: rle:RL0792 putative transposase

DNA sequence : 
GTGCCGGGACTGGGCAATCTCGATCCGGCTTGCCTGTGGACGTTGAACTTCGATCGGTCGACCTACCACTACACCTCTCG
CCGTGCCGATCAGGCCGGCCTCGGACGTCGTATTCGCGAGATCTGCGAGACCCGTGTGCGCTACGGCTATTGGCGCGTGC
ATGTGTTGCTGGAACGCGAAGGTTGGGGCACCAACATCAAGCGAACCTATCGCATTTACAGGGACTTGGGCCTGCAGCTG
CGCAACAAGACTCCAAAGCGCAGGGTCAAGGCAAAGCTGCGGGAAGATCGGCAGACAGCCATCTGCCCGAACGATGTCTG
GGCGATGGATTTCGTGCACGACCAACTCGCGACCGGAAAGAAGCTGCGGGTTCTGACGGTGGTCGACACCTTCTCACGTT
ATGTGCCGGTGCTTGATCCGCGTCACAGCTATCGCGGCGAAGACGTGGTGCAGACATTGGAGCGGGTATGCCGGCAAGTC
GGCTATCCGCGGACGATCCGCGTCGATCAGGGGACGGAGTTTGTGTCTCGCGATCTCGACCTATGGGCCTATGCCAAGGG
CGTCACCCTGGACTTCTCACGTCCTGGAAAGCCCACGGACAACGCCTTCATCGAAGCCTTCAACGGCCGCTTCCGGGCGG
AATGCCTGAACCAGCACTGGTTCCTGACCGTTGCGGATGCGCGCGAAAAGATGGAGGATTGGCGTCGATACTACAACGAG
GAACGGCCTCATGGCGCGATCGGCCATAAGGTGCCGATCTCGCTGATGAATTCCGGAGCCGCAACCAGCCCGCCTCCCTG
A

Protein sequence : 
MPGLGNLDPACLWTLNFDRSTYHYTSRRADQAGLGRRIREICETRVRYGYWRVHVLLEREGWGTNIKRTYRIYRDLGLQL
RNKTPKRRVKAKLREDRQTAICPNDVWAMDFVHDQLATGKKLRVLTVVDTFSRYVPVLDPRHSYRGEDVVQTLERVCRQV
GYPRTIRVDQGTEFVSRDLDLWAYAKGVTLDFSRPGKPTDNAFIEAFNGRFRAECLNQHWFLTVADAREKMEDWRRYYNE
ERPHGAIGHKVPISLMNSGAATSPPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-48 48
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-41 47
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 6e-49 44
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 5e-30 42