|
Name : Sinme_0009 (Sinme_0009) Accession : YP_004547398.1 Strain : Genome accession: NC_015590 Putative virulence/resistance : Unknown Product : Ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 7493 - 8212 bp Length : 720 bp Strand : - Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: smd:Smed_0010 ribonuclease PH DNA sequence : ATGCGGCCATCCGGTAGAAAAACCGACCAAATGCGCAAGGTCTCGTTCGAGCGCAGTTTCTCCAAGCATGCGGAAGGATC CTGCCTGGTACGCTTCGGCGACACGCATGTTCTGTGCACCGCGAGCCTGGAGGAAAAAGTTCCGGCTTGGCTGCGCAACG GCGGCAAAGGCTGGATCACCGCGGAATATGGCATGCTGCCGCGGGCGACCGGCGAGCGCATGAGGCGCGAGGCGGCGACC GGCAAGCAGAGCGGCCGCACGCAGGAGATCCAGAGGCTGATCGGGCGGTCGCTCAGAGCCGTCGTCGATCTTCCGGCGCT CGGCGAACGTCAGATCTCGATCGACTGCGACGTGATTCAGGCCGACGGCGGCACGCGCACCGCGTCGATCACCGGCGCCT GGATCGCCCTCCACGACTGTTTGAAGTGGATGGAGGCGCGCAACATGGTCAAGCTGGAGAAGGTCTTGAAAGATCATGTG GCCGCCATTTCCTGCGGCATCTTCGCCAATCAGCCGGTTATCGACCTCGATTATCTGGAAGACTCGGCTGCGGAGACGGA TGCCAATTTCGTGATGACGGGCAGCGGCGGCCTGGTCGAGATCCAGGGAACGGCGGAAGGCAAGCCCTTCAGCGAAGAAG AATTCGCAAGCCTGATGCTGCTCGCCAAGAACGGCATTGCCGAACTCGTCGAAATGCAGAAGCAGGCGATAGCAGGCTAG Protein sequence : MRPSGRKTDQMRKVSFERSFSKHAEGSCLVRFGDTHVLCTASLEEKVPAWLRNGGKGWITAEYGMLPRATGERMRREAAT GKQSGRTQEIQRLIGRSLRAVVDLPALGERQISIDCDVIQADGGTRTASITGAWIALHDCLKWMEARNMVKLEKVLKDHV AAISCGIFANQPVIDLDYLEDSAAETDANFVMTGSGGLVEIQGTAEGKPFSEEEFASLMLLAKNGIAELVEMQKQAIAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-54 | 52 |
