|
Name : Sinme_0874 (Sinme_0874) Accession : YP_004548243.1 Strain : Genome accession: NC_015590 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 876555 - 878861 bp Length : 2307 bp Strand : + Note : KEGG: smd:Smed_0686 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1 DNA sequence : ATGGTCACGACCGCAAAGCCCATCGCCGCCATCATCGCCAGCGAAATCAAGGCGACCGCCGCCCAGGTCGCGGCGGCCGT CGAATTGCTGGATGGCGGGGCAACCGTGCCTTTCATCGCCCGCTACCGAAAGGAGGTCACCGGCGGCCTCGACGATACGC AACTGCGCGTCCTGTCGGAGCGGCTCACCTATCTGCGTGAGCTTGAAGCGCGGCGGGCGTCGATCGTCGATTCGATCCGC AGCCAGGGCAAGATGACCGACGAGCTCGAAGGCAAGATCGCCGGCGCGGTTACCAAGGCCGAACTCGAAGACATCTACCT GCCCTACAAGCCGAAGCGCCGCACCAAGGCGGAAATCGCGCGCGAACGTGGTCTGGGTGCACTGGCCGAAGCAATCCTTT CCGATCGATCGGTCGCGCCGGCCGAACGCGCGGCCGCTTTCCTCACCGCCGATGTGCCGGACGTCAAGACCGCACTCGAC GGCGCCCGCGATATCATTGCCGAAGCCATGAGCGAGAACGCCGACCTTCTCGGGCGGTTGCGGAACCACATGCGGGAGGT AGCCTTCCTGCGCGCCCGGGTCGTGGACGGCAAGCAGGAGTCCGGCGCCAAATTCTCGGACTATTTCGACCATTCCGAGC GCTGGGCGACGGTGGCCGGGCACCGCGCATTGGCGATGCTGCGCGGCTGGAACGAAGAGGTCCTCTCGGTCGATATCGTA GTCGATCAGGAGGCGTCGCCTTCGCTGAGGCCGACCGAGCGCATGATCGCGGCGGCGTACAATGTCGGCGATCGGTTACC CGCCGACCGGTGGCTGCTGGAGGTGATCGGCTGGACGTGGCGCGTCAAACTCTCGCTCTCGCTGTCGCTGGACCTGATGC GCGAGCTGCGCGAGCGGGCCGAAGAAGAGGCCATCCGCGTCTTCGCGCGCAATCTCAAGGACCTGCTGCTCGCGGCACCG GCGGGCTCGCGCGCGACGATGGGCCTCGACCCCGGCATCCGAACCGGCGTCAAGGTCGCGGTCGTCGACGGCACCGGCAA GCTGCTCGACACCGCCACGGTCTATCCCTTTCCGCCGAAGAACGACATCCGCGGTACCCAGGCGGAGCTTGCGGCGCTCG TGCGCAAGCACAAGGTGGAACTGATCGCGATCGGCAACGGTACCGGTAGCCGTGAAACGGAGAAGCTCGTCGCAGACATG CTCGCTGCCATGCCGGCGCCGAAGCCTACCAAGGTGATCGTGTCCGAGGCGGGCGCATCGGTCTATTCCGCTTCGGAGAC GGCGGCCGCCGAGTTCCCGGGCCTCGACGTTTCCCTGCGGGGCGCCGTCTCGATCGCCCGCCGGCTGCAGGACCCGCTGG CCGAGCTCGTCAAGATCGAACCGAAGTCGATCGGCGTCGGCCAGTACCAGCACGACGTCGACCAGTCGAAGCTCAGCCGC TCGCTCGATGCCGTTGTCGAGGATGCGGTGAACGCCGTTGGGGTCGATCTCAACACCGCCTCGGCGCCGCTCCTGGCGCG TGTCTCGGGGCTGGGCAAGTCCTCGGCCGAGGCAATCGTCGCGCACCGGGATGCGATGGGGGCCTTCGCCAGCCGCAAGG AACTTTTGAAAGTGCCGCGTCTCGGCGCGCGCACCTTCGAGCAGTGCGCCGGCTTCCTGCGGATACCGAACGGGTCCGAG CCGCTCGATGCGTCGGCCGTACATCCGGAAGCCTATGGCGTCGCCAAGAAGATCGTTGCAGCCTGCGGCCGGGACGTGCG CTCGCTGATGGCAGATAGCGCCGAGCTGAAAAAACTCGACCCGCGCATTTTCGTCGACGAGCGCTTCGGCCTGCCGACGG TCAAGGACATCCTGGCCGAACTCGAGAAACCGGGCCGCGATCCGCGCCCGAGCTTCAAGACGGCGACCTTTGCGGAAGGC GTGGACGACATCAAGGATCTGAAAGTCGGGATGCGGCTCGAGGGCACGGTGACCAATGTCGCAGCGTTCGGCGCCTTCGT CGATATCGGCGTGCACCAGGACGGCCTCGTCCACGTGTCGCAACTGGCCGACCGCTTCGTCAAGGATCCGCATGAGGTCG TCAAGGCGGGTGACGTCGTGCAGGTCCGCGTCACGGAGGTCGATGTCGCGCGCAAGCGCATCGGGCTTTCCATGCGCAAG GAAGGCGGCACCGATACGCCCCGCGAGGCGAGGGGGGCGGCACCGAAGGGCGGAAACCGGGGCGGGTCGGCCCGGTCGCA AACACCGCAGGAGCCGGCGCAAGGCGCGTTCGGCGCGGCGCTGATGGCGGCGATGAAGAAAAAATGA Protein sequence : MVTTAKPIAAIIASEIKATAAQVAAAVELLDGGATVPFIARYRKEVTGGLDDTQLRVLSERLTYLRELEARRASIVDSIR SQGKMTDELEGKIAGAVTKAELEDIYLPYKPKRRTKAEIARERGLGALAEAILSDRSVAPAERAAAFLTADVPDVKTALD GARDIIAEAMSENADLLGRLRNHMREVAFLRARVVDGKQESGAKFSDYFDHSERWATVAGHRALAMLRGWNEEVLSVDIV VDQEASPSLRPTERMIAAAYNVGDRLPADRWLLEVIGWTWRVKLSLSLSLDLMRELRERAEEEAIRVFARNLKDLLLAAP AGSRATMGLDPGIRTGVKVAVVDGTGKLLDTATVYPFPPKNDIRGTQAELAALVRKHKVELIAIGNGTGSRETEKLVADM LAAMPAPKPTKVIVSEAGASVYSASETAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQSKLSR SLDAVVEDAVNAVGVDLNTASAPLLARVSGLGKSSAEAIVAHRDAMGAFASRKELLKVPRLGARTFEQCAGFLRIPNGSE PLDASAVHPEAYGVAKKIVAACGRDVRSLMADSAELKKLDPRIFVDERFGLPTVKDILAELEKPGRDPRPSFKTATFAEG VDDIKDLKVGMRLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVQVRVTEVDVARKRIGLSMRK EGGTDTPREARGAAPKGGNRGGSARSQTPQEPAQGAFGAALMAAMKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
