|
Name : Sinme_0473 (Sinme_0473) Accession : YP_004547850.1 Strain : Genome accession: NC_015590 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 486930 - 488414 bp Length : 1485 bp Strand : + Note : KEGG: smd:Smed_0383 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive DNA sequence : ATGACAGATCGTCCGACGATCACCACCACCGCCGGGGCGCCGGTGCCGGACAACCAGAATTCGCTGACGGCAGGCCCGCG TGGCGGCATCATGCTGCAGGATTATCAGCTCATCGAGAAGCTGGCGCACCAGAACCGCGAGCGCATTCCGGAACGCGTCG TCCATGCCAAGGGCTGGGGTGCTTTCGGCTCGCTGAAGATCACCGGCGACATCTCGCAATACACCAGGGCGAAGTGTCTC CAGCCCGGCGCGGAAACGCCGATGCTGGCCCGCTTCTCGACCGTTGCCGGCGAACAGGGCGCCGCCGACCACGAGCGCGA CGTCCGCGGTTTCGCGCTGAAATTCTACACCGATGAAGGCAACTGGGACCTCGTCGGCAACAATACGCCGGTCTTCTTCA TTCGCGATCCCTACAAGTTCCCCGACTTCATCCACACGCAGAAGCGTCATCCGAAGACCAGTCTCCGTTCCGCCACTGCC ATGTGGGACTACTGGTCCCTGTCGCCGGAAAGCCTGCATCAGGTGACGATCCTGATGTCCGACCGCGGCCTCCCGCAGAC GCCGATGCATATGAACGGCTACGGCTCGCACACCTATTCCTTCTGGAACGACGCGGGCGAACGCTATTGGGTCAAGTTCC ACTTCAAGACCCAGCAGGGCCATAAGTTCTTCACCAACGAGGAAGGCGAGGCGGTCATCGGCAAGACCCGCGAGGGCTAT CAGGAGTCACTGTTCTACGCCATCGAGAACGGCGAGTTCCCGCGCTGGACGGTGCAGGTGCAGATCATGCCGGAGCTCGA CGTCGAGAAGACGCCCTACAACCCGTTCGACCTGACCAAGGTCTGGCCGCATGCCGACTACCCGCCGGTCGAGATCGGCG TGCTGGAGCTGAACCGCAACCCGGAAAACTATTTTGCCGAGATCGAGAACGCAGCCTTCTCGCCCTCCAATATCGTGCCC GGCATCGGCTTCTCGCCGGACAAGGTGCTGCAGGCCCGCATCTTCTCCTATGCGGACGCCCACCGCTACCGCCTCGGCAC GCATTACGAGCACATCCCGGTCAACCAGCCGCGCTGCCCGGTTCACCACTATCATCGCGATGGTCAGATGAACACCTATG GCGGCATTCGCACCGGCAATCCGGACGCCTATTACGAGCCCAACTCCTTCAATGGCCCGGCCGAACAGCCGCTGGCCAAG GAACCGCCGCTCAGAATAGACGGCGACATGTCCCGCTACGACCACCGCGTCGGCAATGACGACTACGTCCAGGTGCGGGC GCTGTTCGGCCTCTTCGACGAAGGGCAGAAGTCGCGCCTCTTCTCCAACATCGCGGCCGCCATGGGCGGCGTCCCGGGCG AGATCATCGAGCGGCAGCTCATTCATTTCGCCCGTGTCCACCCGGAATACGAAGCGGGCGTCCGCCAGGCACTGAAGACC GCCCACGGCTACGAGGCGGACACGATCAGCACGGCGGCCGAGTAA Protein sequence : MTDRPTITTTAGAPVPDNQNSLTAGPRGGIMLQDYQLIEKLAHQNRERIPERVVHAKGWGAFGSLKITGDISQYTRAKCL QPGAETPMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTSLRSATA MWDYWSLSPESLHQVTILMSDRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHFKTQQGHKFFTNEEGEAVIGKTREGY QESLFYAIENGEFPRWTVQVQIMPELDVEKTPYNPFDLTKVWPHADYPPVEIGVLELNRNPENYFAEIENAAFSPSNIVP GIGFSPDKVLQARIFSYADAHRYRLGTHYEHIPVNQPRCPVHHYHRDGQMNTYGGIRTGNPDAYYEPNSFNGPAEQPLAK EPPLRIDGDMSRYDHRVGNDDYVQVRALFGLFDEGQKSRLFSNIAAAMGGVPGEIIERQLIHFARVHPEYEAGVRQALKT AHGYEADTISTAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-128 | 58 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-106 | 48 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-104 | 48 |
