Gene Information

Name : Sinme_0413 (Sinme_0413)
Accession : YP_004547790.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Unknown
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 425505 - 426122 bp
Length : 618 bp
Strand : +
Note : KEGG: mag:amb3309 site-specific recombinase; PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix domain; SMART: Resolvase, N-terminal

DNA sequence :
ATGGCGTTGATAGGTTATGCCCGTGTCTCGACGCGAGATCACACAGTCGCCGCGCAGCTCGATGAGCTGCAGAAGGTTGA
GTGCGCCCGAATCTTCGAGGAGACCGCCTCGGAGGCGAACCGCGATCGGCCGCAGCTCGCCGCCGCACTCGACTACATGC
GCGAGGGCGATACGCTCGTGGTGTGGAAGCTCGATCGGCTTGCCCGGTCCCTCAAGCAGCTCATTGAGACAGTCGAAGCC
TTGGAGGATCGCGGAATCGGATTCCGGTCGCTGACCGAAGCGATCGACACGACGAAGGCCGGCGGCGGGCTCGTGGTCCA
GATATTCGGGGCGCTTGCGGAGTTCGAGCGTGGCGTGATCCGCGAGCGTACCCGCGCCGGCCTCAATGCGGCCCGCTCAC
GCGGCCGCAAGGGTGGCCGGCCGCCGAAGTTGAAGGCATCCGATCTGGAGGCCGCGAAGGCACTCCTCGCTGATCGGGAG
ATCAACGTAGAGGACGTGGCCCGCCGCCTTGGTGTCTCGCCAGCGACGCTTTACCGGTATATCCCCGCTGCCAGGTCCAG
CGTCGGTCTGGTCGGCTGGGCCGGATCGGAAAAGACCTCGGAACGGGCTCCTACATAG

Protein sequence :
MALIGYARVSTRDHTVAAQLDELQKVECARIFEETASEANRDRPQLAAALDYMREGDTLVVWKLDRLARSLKQLIETVEA
LEDRGIGFRSLTEAIDTTKAGGGLVVQIFGALAEFERGVIRERTRAGLNAARSRGRKGGRPPKLKASDLEAAKALLADRE
INVEDVARRLGVSPATLYRYIPAARSSVGLVGWAGSEKTSERAPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35059.1 resolvase Not tested SGI1 Protein 9e-36 55
res AGK06929.1 resolvase Not tested SGI1 Protein 9e-36 55
res AGK06966.1 resolvase Not tested SGI1 Protein 9e-36 55
res AGK07012.1 resolvase Not tested SGI1 Protein 9e-36 55
res AGK07070.1 resolvase Not tested SGI1 Protein 9e-36 55
res AAK02044.1 resolvase Not tested SGI1 Protein 9e-36 55
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 9e-36 55
res AGF34985.1 resolvase Not tested SGI1 Protein 9e-36 55
res AGF35025.1 resolvase Not tested SGI1 Protein 9e-36 55
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-35 50
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 8e-33 50
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 8e-33 50
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 6e-33 50
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 9e-29 45
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-29 45
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-29 45