Gene Information

Name : Sinme_3550 (Sinme_3550)
Accession : YP_004550869.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 3675269 - 3676021 bp
Length : 753 bp
Strand : +
Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: smd:Smed_3427 3-deoxy-manno-octulosonate cytidylyltransferase

DNA sequence : 
ATGAATCGTGAACAATCGGGCAAAACCCTCGTACTCATTCCGGCGCGCATGGCGTCGACGCGCCTTCCCGGCAAGCCGCT
TGCCGATATTTGCGGCCTGCCGATGATCGTGCAGGTGGCAAGGCGGGCGGCGGAAGCCGAGGTCGGGCGGATCGTGGTGG
CGGTCGATCATCCCGATGTCTTCGCGGCCGTGACCGGCGCCGGCTTCGAGGCGATCATGACGCGTGTCGATCACCAGTCC
GGCTCCGACCGGATTCACGAGGCGCTCCTGAAGGCCGATCCGCATGGCGAAGCGGAAATCGTCATCAACGTGCAGGGCGA
TCTTCCGACCATCGAGCCCGGTCCGATTCGTGCCGCGCTGAAGCCGCTGGAAAATCCCGCGACCGACATCGCCACACTGA
CCGTGGCGATCACCGACGAACACGAAAAGACCAATCCCAACGTCGTCAAGGTCGTCGGCTCCCCGCTTTCCGACAGCCGC
TTTCGCGCGCTCTATTTCACCCGCGCCACCGCGCCCTATGGCGAAGGGCCCCTCTATCACCACATCGGGCTTTATGCCTA
TCGTCGCAAGGCGCTGGAGACTTTCGTTTCGCTGAAGCCGTCGACGCTCGAGAAGCGCGAATCGCTGGAGCAATTGCGGG
CGCTCGAAGCGGGCATGCGCATCGATGTCGAGGTCGTGGACTCAGTGCCGCTCGGGGTCGACACGCCGGCCGATCTCGAC
AAGGCCCGCCGCATCCTTTCCGCCCGCGTCTGA

Protein sequence : 
MNREQSGKTLVLIPARMASTRLPGKPLADICGLPMIVQVARRAAEAEVGRIVVAVDHPDVFAAVTGAGFEAIMTRVDHQS
GSDRIHEALLKADPHGEAEIVINVQGDLPTIEPGPIRAALKPLENPATDIATLTVAITDEHEKTNPNVVKVVGSPLSDSR
FRALYFTRATAPYGEGPLYHHIGLYAYRRKALETFVSLKPSTLEKRESLEQLRALEAGMRIDVEVVDSVPLGVDTPADLD
KARRILSARV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 9e-30 46
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 9e-29 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 7e-29 45