Gene Information

Name : Sinme_3530 (Sinme_3530)
Accession : YP_004550849.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 3654154 - 3655314 bp
Length : 1161 bp
Strand : +
Note : TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: smd:Smed_3410 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1

DNA sequence : 
ATGACTGCGAAGAAGACGATCAGCGGAGCGCGGATTTTCGACGGCATCGACTGGCACGACGGGGCAGCCCTCGTGATCGA
GGCAGGACACGTCAAGGCGATTGCGCCGGCGGGAAGCGTCCCCGCCGGTGGCGAGACCATCGACGCGCGTGGCCTGCTTC
TCGTGCCCGGCTTCATCGATCTGCAGGTGAACGGCGGCGGCGGCGCGCTTCTGAACGAAAAGCCGTCCCTCGAAAGTATC
CGGCAGATCTGCGCGGCGCATGCGCAATTCGGCACGACGGCGCTGCTGCCGACGCTGATCACCGACACGCGCGCGGTCAG
GACCGCGGCCATCGCCGCAGGCATCGAGGCGAAAGCCGCGGCGGTTCCCGGCTTCCTAGGCCTGCATCTCGAAGGCCCGC
ATCTTTCCGTCGCGCGCAAGGGGGCTCACGATCCGGCGCTGATCCGTCCGATGGGCGATGACGATCTTGCCGAGATACTC
GCCTGCGCAAAGGCGCTCAGCCGTCTGATGCTCACCGTGGCCCCGGAAAACGCCACCAAGGAGCAGGTGCGGGCGCTGGC
CGATGCCGGCGTCGTGGTGAGCCTCGGCCATACCGACGTGGATTACGACACCGCCTGCGCCTATGCCAAAGCGGGTGCCC
GGACCGTCACGCATCTCTTCAACGCCATGAGCGGACTCGGCCATCGCGAGCCTGGCGTGGTCGGCGCGGCGCTTTCGACC
GGCACGCTCCACGCCGGCATGATCGCCGACGGTTTTCACGTTCACCCGGCCTCGATGGGCATCGCGCTGCGCGGCAAGAA
AGGCCCGGGACAGATCTTTCTGGTCACCGACGCCATGTCGCCGATCGGCACCGATCAGACGAGCTTCTTCCTGAACGGAC
GGGAAATCCTGCGCCAGGGCGGGCGCCTGACGCTTGCCGACGGCACGCTTGCCGGCGCCGATATCGACATGCTTTCGTCT
GTCCGCTTCGTCCACCAAAAGCTTGGCCTGCCGATCGAGGAGGCGGTCCGCATGGCCTCCGCCTATCCCGCCGACGCCAT
GGGGATCGCCTCGCACAAGGGCCGGCTCCTGCCGGGTACGGATGCGGATTTCGTGCTGCTCACGCCGGAACTCGCAATGA
AATCGACCTGGATCGGCGGGGAGACGGTTTTTGCGGCTTGA

Protein sequence : 
MTAKKTISGARIFDGIDWHDGAALVIEAGHVKAIAPAGSVPAGGETIDARGLLLVPGFIDLQVNGGGGALLNEKPSLESI
RQICAAHAQFGTTALLPTLITDTRAVRTAAIAAGIEAKAAAVPGFLGLHLEGPHLSVARKGAHDPALIRPMGDDDLAEIL
ACAKALSRLMLTVAPENATKEQVRALADAGVVVSLGHTDVDYDTACAYAKAGARTVTHLFNAMSGLGHREPGVVGAALST
GTLHAGMIADGFHVHPASMGIALRGKKGPGQIFLVTDAMSPIGTDQTSFFLNGREILRQGGRLTLADGTLAGADIDMLSS
VRFVHQKLGLPIEEAVRMASAYPADAMGIASHKGRLLPGTDADFVLLTPELAMKSTWIGGETVFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 5e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_3530 YP_004550849.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 4e-45 41