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Name : Sinme_2683 (Sinme_2683) Accession : YP_004550004.1 Strain : Genome accession: NC_015590 Putative virulence/resistance : Resistance Product : Bcr/CflA subfamily drug resistance transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2695760 - 2696959 bp Length : 1200 bp Strand : + Note : KEGG: smd:Smed_2519 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1 DNA sequence : ATGCCTACAAAAAACCATGTCTGGCGCTATTCGCTGCCGGCAGCGCTGCTGCTGATGGCGCCCTTCGATATCCTCGCCTC TCTGGCCATGGATATTTATCTCCCGATCGTTCCTGCGATGCCCGGTATTCTCGGCACCAGCCCCGCCGTGGTTCAGCTCA CGCTGAGCCTCTATATGGTGATGCTCGGCCTCGGCCAGATCGTCTTCGGGCCCGTCTCCGACCGCATCGGGCGACGGCCA GTCCTGATCGGCGGAGCGATGCTGTTCGCCGCCGCATCGTTCTGCCTCGCGGCTTCCTCCAGCGCCATCCCTTTCGTCGC CTTCCGCTTCCTCCAGGCGGTTGGCGCATCTGCGGCTCTGGTGGCCACCTTTGCAACGATCCGGGATGTATATGCCGACC GCCCGGAAAGCGTGGTCATCTACAGCCTGTTCAGTTCCATTCTGGCATTCGTTCCCGCTCTGGGGCCGATAACCGGTGCC ATGCTGGCGGAGAGGTTCGGATGGCGCTCGATCTTCGTTACGCTGGGTGCATTAGCCATAATCGCGCTGCTGCAGGCACT GCCTCGCTGGCATGAATCCCGCCCTTCGGCGGCAGCGCTGTCGCGGCACGCATTCGGCCCCCTTTTCCGCAGCCTCGCCT TCTGGACCTATACCCTCGGCTTCAGCGCCGCCATGGGCACGTTCTTCGTGTTCTTTTCCACCTCGCCGCGCGTGCTGATC GACAAGGCAGGATATTCGGAGCTGCAGTTCAGCCTCGCCTTTGCAACTGTAGCAATCGTGATGATCATCACGGCGCGCTT TGCCGAGCGGTTCGTCTCCCGATGGGGAACTTCGGGCAGCCTCCTGCGGGGCATGTGCATGTTGCTTCTCGGGGCAGCGC TCCTGATTGCCGGGGAAACGTTCGGCGTCCCTTCGTCCTGGACCTTCGTCATGCCGATGTGGGTGATGGCGGTCGGCATC GTCTTCACCGTATCGGTGACCGCAAACGGCGCTCTCGAGGATTTTGGAGACATGGCGGGTTCGGCGGTCGCAGTCTATTT CTGCGTCCAAAGCCTCATCGTCGGGACGGCGGGGACACTGCTCGTGATCGGACTGCCCGGCGACAGCGCGTGGCCGCTTG TCGTCTATGCCTCGATTATGGCCGGCGTTGTGCTGATCGCGCGCCGGCAGTTGCATTCCAGAAGGCATGTGCAGGCATGA Protein sequence : MPTKNHVWRYSLPAALLLMAPFDILASLAMDIYLPIVPAMPGILGTSPAVVQLTLSLYMVMLGLGQIVFGPVSDRIGRRP VLIGGAMLFAAASFCLAASSSAIPFVAFRFLQAVGASAALVATFATIRDVYADRPESVVIYSLFSSILAFVPALGPITGA MLAERFGWRSIFVTLGALAIIALLQALPRWHESRPSAAALSRHAFGPLFRSLAFWTYTLGFSAAMGTFFVFFSTSPRVLI DKAGYSELQFSLAFATVAIVMIITARFAERFVSRWGTSGSLLRGMCMLLLGAALLIAGETFGVPSSWTFVMPMWVMAVGI VFTVSVTANGALEDFGDMAGSAVAVYFCVQSLIVGTAGTLLVIGLPGDSAWPLVVYASIMAGVVLIARRQLHSRRHVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| floR | YP_005176183.1 | florfenicol / chloramphenicol efflux protein | Not tested | ICEPmu1 | Protein | 6e-106 | 68 |
| flo | AAK02049.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-107 | 67 |
| floRc | AGK06972.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-107 | 67 |
| floRc | AGK07102.1 | chloramphenicol and florfenicol resistance protein | Not tested | SGI1 | Protein | 3e-107 | 67 |
| cmlA9 | ABZ01840.1 | CmlA9 chloramphenicol efflux protein | Not tested | SGI2 | Protein | 5e-107 | 66 |
| cmlA | CAJ77032.1 | chloramphenicol and florfenicol resistance protein | Not tested | AbaR1 | Protein | 5e-107 | 66 |
| cml(A)5 | ACY75522.1 | CmLA(5) | Not tested | Tn6060 | Protein | 3e-80 | 50 |
| cmlA5 | CAJ77046.1 | Chloramphenicol resistance protein | Not tested | AbaR1 | Protein | 2e-79 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sinme_2683 | YP_004550004.1 | Bcr/CflA subfamily drug resistance transporter | AF156486.gene.p01 | Protein | 2e-79 | 50 |
| Sinme_2683 | YP_004550004.1 | Bcr/CflA subfamily drug resistance transporter | DQ984668.gene.p01 | Protein | 2e-80 | 50 |
| Sinme_2683 | YP_004550004.1 | Bcr/CflA subfamily drug resistance transporter | AF294653.1.gene4.p01 | Protein | 1e-80 | 50 |
| Sinme_2683 | YP_004550004.1 | Bcr/CflA subfamily drug resistance transporter | DQ522237.1.gene4.p01 | Protein | 2e-80 | 50 |
| Sinme_2683 | YP_004550004.1 | Bcr/CflA subfamily drug resistance transporter | NC_010410.6003586.p0 | Protein | 2e-80 | 50 |
