Gene Information

Name : Sinme_1034 (Sinme_1034)
Accession : YP_004548400.1
Strain :
Genome accession: NC_015590
Putative virulence/resistance : Resistance
Product : chloramphenicol O-acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1045131 - 1045781 bp
Length : 651 bp
Strand : +
Note : KEGG: rhi:NGR_c10150 streptogramin A acetyl transferase

DNA sequence : 
ATGCCACCCATCCATTCCGCGCCTGATCCAGGCGCCGCCTTTCCCGTCGCCGAGTTCCCGCGCATCGGATTTCTCAGGAA
CATCGTGCGCTCGCCACTGATCGAGGCCGGCGAGTTCAGCTATTACGACGATCCGGACGGTCCCGAGCGCTTCGAAGAGA
AGTGCGTTCTCTATCACTATGACTTCGTGGGCGATCGGCTGGTGATCGGCCGCTTCTGTGCGCTGGCGACCGGCATACAG
TTCATCATGAACGGGGCCAACCACGCGACCGGAGGCTTCTCGACCTTTCCGTTCGGCATCTTCCCCGGTGCCTGGCGCGA
TGGCTTCGACCCTGACGCCTACAGGACCGGTTATCGTGGCGACACGACCGTCGGAAACGATGTCTGGATCGGCATGGAGG
CGACCATTTTGCCGGGCGTGACGATCGGCGATGGCGCGATCGTTGCGGCAAAAGCGGTCGTTACGAAGGATGTGCCTCCC
TATGCCGTCGTCGCGGGCAATCCCGCACGGGTGGTGAGATTGCGCTTCCCCGATGCGACGATCGAGCGATTGCAGGCGAT
TGCCTGGTGGCGTTGGCCGATCGACAAGGTGACGCGCAACATCGCGGCGATAACCGGCGCCGATCTCGATGCACTGGAAG
GCGCCCGGTAG

Protein sequence : 
MPPIHSAPDPGAAFPVAEFPRIGFLRNIVRSPLIEAGEFSYYDDPDGPERFEEKCVLYHYDFVGDRLVIGRFCALATGIQ
FIMNGANHATGGFSTFPFGIFPGAWRDGFDPDAYRTGYRGDTTVGNDVWIGMEATILPGVTIGDGAIVAAKAVVTKDVPP
YAVVAGNPARVVRLRFPDATIERLQAIAWWRWPIDKVTRNIAAITGADLDALEGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinme_1034 YP_004548400.1 chloramphenicol O-acetyltransferase NC_002516.2.878374.p Protein 3e-27 44
Sinme_1034 YP_004548400.1 chloramphenicol O-acetyltransferase JF268688.1.gene6.p01 Protein 2e-27 41
Sinme_1034 YP_004548400.1 chloramphenicol O-acetyltransferase AY123251.gene2.p01 Protein 8e-27 41