Gene Information

Name : Desru_0769 (Desru_0769)
Accession : YP_004544338.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 783692 - 784372 bp
Length : 681 bp
Strand : +
Note : KEGG: gym:GYMC10_3132 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
TTGAAAAGAATACTGGTTGTAGATGATGAGCCGGCGATTCGGGATTTGGTGCAGATGGTTTTAAGCCGGGAGGGTTACCA
GGTAATGACCGCTTCAGACGGACAAAGCGCTTTAGTGGCAGCAGATGCCGTTAAACCGGATTTAATTGTGCTGGACCTGA
TGCTGCCGGATATTAGCGGCCACGAGGTATGCAGGAAAATTACCGAGCAATACCAAACACCGGTGATCATGCTCACTGCA
AAAAATGATGTGGTGGATAAGGTATTAGGTTTGGAATTTGGCGCCGATGATTACATTACCAAACCCTTTGATGCCCGGGA
ACTCCTTGCCAGAGTCAAGGCGCTGCTGCGGCGCTTGGATAAGCGGCAGGGGCCCCAAGAAACCATTGTTTATAAAGATT
TGCTTATAAATTTAATGAATAAAACCGTAACCAAGAGCCAGCAGTCCCTTTCTCTGACACCCAAAGAATTTCAGCTTTTA
GAAGTGCTGGCGGCGCACCCTCGGCGGATTTTCAGCAGAGATGAACTGATGACGCTGGCCTGGGGTTACGATTATACCGG
TGACAGCAGAGCCGTAGATATTCATATTACCCGTTTACGCAAAAAAATTGAGGACAATACCAGCCAACCTCAATACATTA
TTACGGTTTACGGATTTGGTTATCGTTTCGGAGGGGTGTAA

Protein sequence : 
MKRILVVDDEPAIRDLVQMVLSREGYQVMTASDGQSALVAADAVKPDLIVLDLMLPDISGHEVCRKITEQYQTPVIMLTA
KNDVVDKVLGLEFGADDYITKPFDARELLARVKALLRRLDKRQGPQETIVYKDLLINLMNKTVTKSQQSLSLTPKEFQLL
EVLAAHPRRIFSRDELMTLAWGYDYTGDSRAVDIHITRLRKKIEDNTSQPQYIITVYGFGYRFGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-32 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0769 YP_004544338.1 response regulator receiver NC_012469.1.7686381. Protein 2e-37 45
Desru_0769 YP_004544338.1 response regulator receiver NC_012469.1.7685629. Protein 3e-39 45
Desru_0769 YP_004544338.1 response regulator receiver HE999704.1.gene2815. Protein 9e-42 45
Desru_0769 YP_004544338.1 response regulator receiver AE016830.1.gene1681. Protein 2e-38 44
Desru_0769 YP_004544338.1 response regulator receiver AE000516.2.gene3505. Protein 2e-43 43
Desru_0769 YP_004544338.1 response regulator receiver FJ349556.1.orf0.gene Protein 6e-36 42
Desru_0769 YP_004544338.1 response regulator receiver AF155139.2.orf0.gene Protein 7e-34 42
Desru_0769 YP_004544338.1 response regulator receiver NC_005054.2598277.p0 Protein 2e-31 42
Desru_0769 YP_004544338.1 response regulator receiver NC_014475.1.orf0.gen Protein 2e-31 42
Desru_0769 YP_004544338.1 response regulator receiver AM180355.1.gene1830. Protein 4e-32 42
Desru_0769 YP_004544338.1 response regulator receiver NC_010410.6002989.p0 Protein 2e-33 41
Desru_0769 YP_004544338.1 response regulator receiver NC_010400.5986590.p0 Protein 7e-33 41
Desru_0769 YP_004544338.1 response regulator receiver NC_011595.7057856.p0 Protein 2e-33 41
Desru_0769 YP_004544338.1 response regulator receiver BAC0308 Protein 1e-26 41
Desru_0769 YP_004544338.1 response regulator receiver CP000675.2.gene1535. Protein 1e-30 41
Desru_0769 YP_004544338.1 response regulator receiver NC_002952.2859905.p0 Protein 3e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_009782.5559369.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_002951.3237708.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver DQ212986.1.gene4.p01 Protein 2e-31 41
Desru_0769 YP_004544338.1 response regulator receiver NC_002758.1121668.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_009641.5332272.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_013450.8614421.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_007793.3914279.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_007622.3794472.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_003923.1003749.p0 Protein 2e-37 41
Desru_0769 YP_004544338.1 response regulator receiver NC_002745.1124361.p0 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0769 YP_004544338.1 response regulator receiver VFG1563 Protein 3e-32 42
Desru_0769 YP_004544338.1 response regulator receiver VFG1702 Protein 1e-32 42
Desru_0769 YP_004544338.1 response regulator receiver VFG1390 Protein 3e-34 41
Desru_0769 YP_004544338.1 response regulator receiver VFG1389 Protein 9e-25 41