Gene Information

Name : Desru_0502 (Desru_0502)
Accession : YP_004544074.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 514623 - 515306 bp
Length : 684 bp
Strand : -
Note : KEGG: cdl:CDR20291_0862 predicted abc transporter, atpase component; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
TTGGATATATTAACGGTAAAAGATTTATGTAAAACCTATGGAACGGGCGACCTGAAAGTAGACGCTTTAAAAAATGCGTC
CTTTTCCGTTTCCAAAGGAGAATTTGTTGTCATCGTAGGGCCTTCCGGCTCCGGGAAAAGTACCTTGCTCAATCTGCTGG
GCGGATTGGATACACCCACATCCGGCAGGGTATTCTTGGACGGCAAGGATCTTTTTACTATGAAGGAAAAGGAATTATCG
GTTTTTCGCAGACGAAATATCGGCTTTATCTTTCAGGCGTATAATTTGGTGCCGGAACTCAACGTGGAAGAAAACGTAAT
TCTGCCACTACTTTTAGACTATAGAAAACCCGATCAAAATTACATTGACGAACTGCTGGGCATATTGGGCCTAACGGACA
GAAAGCATCATCTGCCCAATCAGCTTTCGGGCGGTCAGCAGCAGCGCGTGGCCATCGGACGGGCTTTGGCAACCAAACCC
GCCCTTATTCTGGCAGACGAACCCACCGGAAATCTGGACAGCAAAAACAGTCAGGAGGTTATCAGCCTTATGAAGCTGTC
CGTTGAAAGGTATAAACAAACACTGCTTATGATTACGCACAATCAAAGCTACGCCTCCCTTGCCGACCGCGTGCTGGGCG
TTGAAGACGGAAAGGTGACCGATTTGGGAGGGACGGAACAATGA

Protein sequence : 
MDILTVKDLCKTYGTGDLKVDALKNASFSVSKGEFVVIVGPSGSGKSTLLNLLGGLDTPTSGRVFLDGKDLFTMKEKELS
VFRRRNIGFIFQAYNLVPELNVEENVILPLLLDYRKPDQNYIDELLGILGLTDRKHHLPNQLSGGQQQRVAIGRALATKP
ALILADEPTGNLDSKNSQEVISLMKLSVERYKQTLLMITHNQSYASLADRVLGVEDGKVTDLGGTEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-37 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-37 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 6e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0502 YP_004544074.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-75 66
Desru_0502 YP_004544074.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-57 58
Desru_0502 YP_004544074.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-34 45
Desru_0502 YP_004544074.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-42 43
Desru_0502 YP_004544074.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-36 41