Gene Information

Name : Desru_0496 (Desru_0496)
Accession : YP_004544068.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 507498 - 508196 bp
Length : 699 bp
Strand : +
Note : KEGG: drm:Dred_2981 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence :
ATGAGCCCGCTGCGTATCTTAGTGGTTGACGATGAAGATAAAATTCGCCAGGTCATCAGCATTTATTTAAAAAATGAAGG
CTACATGGTAGGGGAAGCCATGGATGGGGAAGAGGCCTTGAAAAAATACCGGTCGGAACCCTGGGATTTGATTGTTCTGG
ACGTAATGATGCCTAAAATGGACGGAATTTCGGTATGCCGTGAAATTCGCAAGACTTCCCAAATACCCATTATCATGCTA
ACCGCTAAAAATGAAGAGGTGGACCGTATTTTAGGCCTGGAGTTCGGAGCGGACGATTATATGGGCAAACCCTTCAGTCC
CCGGGAACTGGTAGCCCGTATCAAAGCGGTTATGCGGCGTATGGAGGCCGGCAGCCCGGCAGGAGAACCGGTGCTGAATT
TTCCGGGTATGCGCATGAACTTAATGACCCGGGAAGTATTGTTAATGGATAAACCGGTGACTTTAACTCCCCGGGAATTT
GAACTGTTATCCCTTTTGGCCAGAAATCCCGGCTGGTCCTTTACCCGGGAGCAGCTTTTGGAACGGGTATGGGGCTTTGA
CTACTACGGTGACCTGAGAACGGTAGATACCCACATTAACCGTCTGCGGGATAAATTAAAGGTTCCCGGCGCTCCTTCCT
ATATCGGGACCGTATGGGGAGTGGGTTATAAATTTGAGGTGAAACATGAGGCTGAATAA

Protein sequence :
MSPLRILVVDDEDKIRQVISIYLKNEGYMVGEAMDGEEALKKYRSEPWDLIVLDVMMPKMDGISVCREIRKTSQIPIIML
TAKNEEVDRILGLEFGADDYMGKPFSPRELVARIKAVMRRMEAGSPAGEPVLNFPGMRMNLMTREVLLMDKPVTLTPREF
ELLSLLARNPGWSFTREQLLERVWGFDYYGDLRTVDTHINRLRDKLKVPGAPSYIGTVWGVGYKFEVKHEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-42 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0496 YP_004544068.1 response regulator receiver NC_002758.1121668.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_009641.5332272.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_013450.8614421.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_007793.3914279.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_002745.1124361.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_009782.5559369.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_002951.3237708.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_003923.1003749.p0 Protein 4e-46 50
Desru_0496 YP_004544068.1 response regulator receiver NC_002952.2859905.p0 Protein 6e-46 49
Desru_0496 YP_004544068.1 response regulator receiver NC_007622.3794472.p0 Protein 5e-46 49
Desru_0496 YP_004544068.1 response regulator receiver DQ212986.1.gene4.p01 Protein 6e-41 47
Desru_0496 YP_004544068.1 response regulator receiver HE999704.1.gene2815. Protein 3e-44 47
Desru_0496 YP_004544068.1 response regulator receiver NC_012469.1.7685629. Protein 5e-45 47
Desru_0496 YP_004544068.1 response regulator receiver AE000516.2.gene3505. Protein 1e-40 46
Desru_0496 YP_004544068.1 response regulator receiver NC_002695.1.916589.p Protein 8e-39 45
Desru_0496 YP_004544068.1 response regulator receiver CP001138.1.gene2239. Protein 4e-38 45
Desru_0496 YP_004544068.1 response regulator receiver CP000647.1.gene2531. Protein 3e-38 45
Desru_0496 YP_004544068.1 response regulator receiver CP001918.1.gene3444. Protein 2e-38 45
Desru_0496 YP_004544068.1 response regulator receiver BAC0039 Protein 1e-38 45
Desru_0496 YP_004544068.1 response regulator receiver BAC0596 Protein 4e-38 45
Desru_0496 YP_004544068.1 response regulator receiver CP000034.1.gene2186. Protein 1e-38 45
Desru_0496 YP_004544068.1 response regulator receiver AF155139.2.orf0.gene Protein 7e-45 44
Desru_0496 YP_004544068.1 response regulator receiver AM180355.1.gene1830. Protein 6e-39 44
Desru_0496 YP_004544068.1 response regulator receiver NC_012469.1.7686381. Protein 5e-44 44
Desru_0496 YP_004544068.1 response regulator receiver EU250284.1.orf4.gene Protein 4e-40 44
Desru_0496 YP_004544068.1 response regulator receiver AF162694.1.orf4.gene Protein 4e-36 44
Desru_0496 YP_004544068.1 response regulator receiver CP000034.1.gene3671. Protein 6e-44 44
Desru_0496 YP_004544068.1 response regulator receiver BAC0533 Protein 4e-28 43
Desru_0496 YP_004544068.1 response regulator receiver NC_014475.1.orf0.gen Protein 4e-42 43
Desru_0496 YP_004544068.1 response regulator receiver CP000647.1.gene4257. Protein 4e-28 43
Desru_0496 YP_004544068.1 response regulator receiver NC_005054.2598277.p0 Protein 4e-42 43
Desru_0496 YP_004544068.1 response regulator receiver AE016830.1.gene1681. Protein 6e-44 43
Desru_0496 YP_004544068.1 response regulator receiver CP001918.1.gene5135. Protein 3e-25 43
Desru_0496 YP_004544068.1 response regulator receiver FJ349556.1.orf0.gene Protein 2e-42 42
Desru_0496 YP_004544068.1 response regulator receiver AF130997.1.orf0.gene Protein 2e-38 42
Desru_0496 YP_004544068.1 response regulator receiver CP000034.1.gene3834. Protein 3e-27 42
Desru_0496 YP_004544068.1 response regulator receiver CP001138.1.gene4273. Protein 1e-27 42
Desru_0496 YP_004544068.1 response regulator receiver NC_002695.1.915041.p Protein 3e-27 42
Desru_0496 YP_004544068.1 response regulator receiver AE015929.1.gene1106. Protein 8e-34 41
Desru_0496 YP_004544068.1 response regulator receiver CP004022.1.gene3215. Protein 1e-31 41
Desru_0496 YP_004544068.1 response regulator receiver CP004022.1.gene1676. Protein 2e-34 41
Desru_0496 YP_004544068.1 response regulator receiver AF253562.2.orf0.gene Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0496 YP_004544068.1 response regulator receiver VFG1563 Protein 2e-42 44
Desru_0496 YP_004544068.1 response regulator receiver VFG1390 Protein 2e-40 43
Desru_0496 YP_004544068.1 response regulator receiver VFG1702 Protein 5e-42 43
Desru_0496 YP_004544068.1 response regulator receiver VFG1389 Protein 4e-33 41