Gene Information

Name : Desru_0481 (Desru_0481)
Accession : YP_004544053.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 489450 - 490133 bp
Length : 684 bp
Strand : -
Note : KEGG: tjr:TherJR_2684 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGACCGGGCAAAAAATTTTGGTAATTGAAGATGAGTTAAAACTTTCAAGATTTATTGAGTTAGAACTAAAACATGAAGG
ATATCAGGTGGAACAGGCCCACAATGGCAGAGACGGGCTGCAAAAAGCCCTTGACGGAGAATTTGATCTTATCTTACTGG
ATATTATGCTCCCCTCCATCAATGGTATGGAAATATTGAGGAGAGTCAGGAAACATTCCGAAGTTCCGGTCATTCTGCTC
ACTGCTAAGGATGAAACCATGGATAAGGTCATGGGATTAGACATGGGGGCTGACGACTACGTAACCAAACCTTTTGCTAT
TGAGGAACTTCTGGCCAGAATCAGGGTGGCCTTAAAAAGAAAAGCACCGGCCATAAAAAGCTCTGTTTTACAAGTCCATG
GGTTAAAAATGGATTTAGATCAATACTCCGTTACTTTTAATCATGAACCCATTGAGTTAACCAAAAGGGAGTTTGATTTA
TTAAGATATTTTTTAGAAAATAAAAATATTGTTCTTACCAGGGAAAAGCTTCTTGAGGCCGTATGGGGATACGGCTACGC
AGGAGATACCAACATTGTGGATGTCTATATAAGATACCTCAGAAGCAAGATTGACGATAAATATCATAAAAAAGTCATTC
ATACGGTGCGAGGGGTGGGGTATCTTCTAAAGGATGAAGAATAA

Protein sequence : 
MTGQKILVIEDELKLSRFIELELKHEGYQVEQAHNGRDGLQKALDGEFDLILLDIMLPSINGMEILRRVRKHSEVPVILL
TAKDETMDKVMGLDMGADDYVTKPFAIEELLARIRVALKRKAPAIKSSVLQVHGLKMDLDQYSVTFNHEPIELTKREFDL
LRYFLENKNIVLTREKLLEAVWGYGYAGDTNIVDVYIRYLRSKIDDKYHKKVIHTVRGVGYLLKDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-45 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-43 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0481 YP_004544053.1 response regulator receiver NC_002758.1121390.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_010079.5776364.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_002952.2859858.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_007622.3794948.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_003923.1003417.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_013450.8614146.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_002951.3238224.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver NC_007793.3914065.p0 Protein 3e-54 55
Desru_0481 YP_004544053.1 response regulator receiver AE015929.1.gene1106. Protein 2e-49 54
Desru_0481 YP_004544053.1 response regulator receiver HE999704.1.gene1528. Protein 7e-49 50
Desru_0481 YP_004544053.1 response regulator receiver BAC0308 Protein 1e-41 45
Desru_0481 YP_004544053.1 response regulator receiver BAC0111 Protein 1e-43 45
Desru_0481 YP_004544053.1 response regulator receiver BAC0125 Protein 1e-43 44
Desru_0481 YP_004544053.1 response regulator receiver BAC0347 Protein 1e-40 44
Desru_0481 YP_004544053.1 response regulator receiver NC_012469.1.7685629. Protein 3e-41 43
Desru_0481 YP_004544053.1 response regulator receiver BAC0197 Protein 3e-43 43
Desru_0481 YP_004544053.1 response regulator receiver BAC0638 Protein 2e-39 42
Desru_0481 YP_004544053.1 response regulator receiver AE016830.1.gene1681. Protein 7e-45 42
Desru_0481 YP_004544053.1 response regulator receiver AE000516.2.gene3505. Protein 3e-33 42
Desru_0481 YP_004544053.1 response regulator receiver BAC0083 Protein 7e-44 41
Desru_0481 YP_004544053.1 response regulator receiver NC_002952.2859905.p0 Protein 9e-40 41
Desru_0481 YP_004544053.1 response regulator receiver NC_009782.5559369.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_002951.3237708.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_007622.3794472.p0 Protein 9e-40 41
Desru_0481 YP_004544053.1 response regulator receiver NC_002758.1121668.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_009641.5332272.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_013450.8614421.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_007793.3914279.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_003923.1003749.p0 Protein 1e-39 41
Desru_0481 YP_004544053.1 response regulator receiver NC_002745.1124361.p0 Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0481 YP_004544053.1 response regulator receiver VFG0596 Protein 4e-45 46
Desru_0481 YP_004544053.1 response regulator receiver VFG1389 Protein 4e-40 42
Desru_0481 YP_004544053.1 response regulator receiver VFG1702 Protein 9e-33 41