Gene Information

Name : Desru_0409 (Desru_0409)
Accession : YP_004543985.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 408011 - 408730 bp
Length : 720 bp
Strand : +
Note : KEGG: sth:STH2007 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGGGAAAGAACCAATTAATTCAACCGGAAGGGACGAGACCTCTGGTGCTTCTGGTAGACGACGAGACCGATTTGGTAAC
CGGCCTTAGCAACACCTTGACCGAGGCCGGTTTTAGGGTGGTCTCTGCCGGGGATGGCGGGGAGGCTCTGGCTGTATTTA
GAAAAGCCCTGCCGGATCTGGTGATTTTGGATTTGATGCTTCCCGTTAAAGACGGGCTGGAGGTCTGCGGCGAGCTGCGC
AAAATTTCCGATGTGCCGATCATCATGCTGACGGCCCGGGATGACAGCATTGACAAAATTTTAGGGCTGGAGTTTGGGGC
TGATGACTATGTAACAAAGCCCTTTAACAGCCGGGAACTGGTAGCCCGTATCCGGTCCATACTGCGCCGAACCCGGCGGC
AGTACCAGGGTTCCACTTTAACCGTAGGAAAGGGCCGGGTTTGCATTCATTTAAACGAACAAGTTGTTATGGTAGAGGGA
CGGCAGGCCACCCTAACCCCCACCGAACTTGCTCTGCTGATTCATTTTGCCCGCCATCCGGGACAGGTATTTTCACGGAT
GGCCCTGCTGGAAACCGTCTGGGGTTACGATTTTCCGGGAGACCTGCGCACCGTGGATGTGCATGTGCGCAGACTGCGCC
GCAAAATAGAGGCGGACCCTGCCAATCCCACAATTATTTTAACAAGGTTTGGTGTAGGCTATGTTTTGGCTCAGGGATAG

Protein sequence : 
MGKNQLIQPEGTRPLVLLVDDETDLVTGLSNTLTEAGFRVVSAGDGGEALAVFRKALPDLVILDLMLPVKDGLEVCGELR
KISDVPIIMLTARDDSIDKILGLEFGADDYVTKPFNSRELVARIRSILRRTRRQYQGSTLTVGKGRVCIHLNEQVVMVEG
RQATLTPTELALLIHFARHPGQVFSRMALLETVWGYDFPGDLRTVDVHVRRLRRKIEADPANPTIILTRFGVGYVLAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-35 45
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0409 YP_004543985.1 response regulator receiver AE000516.2.gene3505. Protein 3e-40 52
Desru_0409 YP_004543985.1 response regulator receiver NC_012469.1.7685629. Protein 8e-40 50
Desru_0409 YP_004543985.1 response regulator receiver HE999704.1.gene2815. Protein 2e-32 46
Desru_0409 YP_004543985.1 response regulator receiver NC_002952.2859905.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_002951.3237708.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_003923.1003749.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_002758.1121668.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_009641.5332272.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_013450.8614421.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_007793.3914279.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_007622.3794472.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_002745.1124361.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_009782.5559369.p0 Protein 2e-34 45
Desru_0409 YP_004543985.1 response regulator receiver NC_013450.8614146.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_002951.3238224.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_007793.3914065.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_002758.1121390.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_010079.5776364.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_002952.2859858.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_007622.3794948.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver NC_003923.1003417.p0 Protein 1e-25 42
Desru_0409 YP_004543985.1 response regulator receiver BAC0197 Protein 8e-24 42
Desru_0409 YP_004543985.1 response regulator receiver NC_012469.1.7686381. Protein 6e-29 42
Desru_0409 YP_004543985.1 response regulator receiver BAC0039 Protein 2e-28 42
Desru_0409 YP_004543985.1 response regulator receiver CP000034.1.gene2186. Protein 2e-28 42
Desru_0409 YP_004543985.1 response regulator receiver NC_002695.1.916589.p Protein 2e-28 42
Desru_0409 YP_004543985.1 response regulator receiver CP000647.1.gene2531. Protein 5e-28 42
Desru_0409 YP_004543985.1 response regulator receiver AE015929.1.gene1106. Protein 4e-22 41
Desru_0409 YP_004543985.1 response regulator receiver NC_010400.5986590.p0 Protein 2e-28 41
Desru_0409 YP_004543985.1 response regulator receiver NC_010410.6002989.p0 Protein 4e-28 41
Desru_0409 YP_004543985.1 response regulator receiver NC_011595.7057856.p0 Protein 4e-28 41
Desru_0409 YP_004543985.1 response regulator receiver AE016830.1.gene1681. Protein 2e-32 41
Desru_0409 YP_004543985.1 response regulator receiver CP001918.1.gene3444. Protein 4e-28 41
Desru_0409 YP_004543985.1 response regulator receiver BAC0596 Protein 2e-27 41
Desru_0409 YP_004543985.1 response regulator receiver CP001138.1.gene2239. Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0409 YP_004543985.1 response regulator receiver VFG1563 Protein 1e-35 45
Desru_0409 YP_004543985.1 response regulator receiver VFG1702 Protein 3e-35 44
Desru_0409 YP_004543985.1 response regulator receiver VFG1389 Protein 1e-25 44
Desru_0409 YP_004543985.1 response regulator receiver VFG1390 Protein 1e-26 43
Desru_0409 YP_004543985.1 response regulator receiver VFG1386 Protein 2e-23 42