Gene Information

Name : Desru_3881 (Desru_3881)
Accession : YP_004547367.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3950132 - 3950551 bp
Length : 420 bp
Strand : -
Note : KEGG: drm:Dred_3307 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGCTCAATAAGGTGATATTAATTGGGCGTCTGACCCGTGATCCAGAGCTTCGTTATACCACCAGCGGTATGGCTGTGGC
CAAGCTGGGTTTGGCTGTTGATCGCCCTCAATTTAATAAGGAACGGGAAAAAGAAACGGATTTTATTGATATCGTGGTTT
GGTCTAAGCTGGCAGAGATCTGCGCCAATAATTTGGGCAAAGGTCGGCTGGTAGCGGTGGATGGCCGGCTGCAAATCCGT
TCCTATGAAGACAATCAAGGGGTAAAGCGGAAGGTTGCCGAGGTTGTAGCTGAAAACATCAAGTTTTTAGACTGGCCTAG
AGATCGGGAGGCTACAGGAGGCAACGCATCCCATGGCAGCGGCAGTGGTAGCGGTTTTGGCAGCGAAATTAGTTTTAACG
GAGACGACATACCGTTCTAG

Protein sequence :
MLNKVILIGRLTRDPELRYTTSGMAVAKLGLAVDRPQFNKEREKETDFIDIVVWSKLAEICANNLGKGRLVAVDGRLQIR
SYEDNQGVKRKVAEVVAENIKFLDWPRDREATGGNASHGSGSGSGFGSEISFNGDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-21 53
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-22 52
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-23 52
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-23 52
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-23 52
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-22 51
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 4e-22 51
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-23 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-23 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-23 51
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-19 50
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-18 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-17 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 4e-17 45