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Name : Desru_3588 (Desru_3588) Accession : YP_004547076.1 Strain : Desulfotomaculum ruminis DSM 2154 Genome accession: NC_015589 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease HsdR family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3631693 - 3634707 bp Length : 3015 bp Strand : + Note : TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: mpi:Mpet_1680 type I site-specific deoxyribonuclease; SMART: DEAD-like helicase DNA sequence : ATGCCATATACCGAAGCAAATTATGAAAATGCGGTGCTTGAGGTTTTCCGCGACACATTGGGTTACGGCTATTCCTACGG GCCTGATGTTGTGCGCGATTATTCCGACCCACTGTATACAGACGAGTTGCTGCCTGCCCTGCGGCGCGTCAACTCGAAAC TCCCGGAAGTTGCACTCTCCGAGGCGGTTTATAAGCTGCGCAATTTCGAAGGTGGCACGGTGTTGCAGAAAAACGTCCAA TTTATGGACTACCTCCAAAACGGCGTATCAGTGAATTATTATGACAAGGGTGAACAACGTTCCGCACTCGTTCAGCTTGT GGACTTTGATAACATCAAGCAAAACACTTTCACTGTCGCTAACCAGTGGACTATTACCGAAAACAGTGAGAAACGTCCAG ATGTTATTGTGTTCCTGAACGGTCTGCCTGTAGTGGTATTCGAGTTAAAGTCACCGAGTCGCGAGGAAACCGATGCTAGC GAAGCTTATCGCCAGCTTCGTAACTATATGAAAGAGATCCCATCCCTGTTCATCTACAACGCTTTTCTTGTGATGAGCGA CCTCGCCACTTCCAAAGCGGGTACAATCACCGCCGATGAAGACCGTTTTATGGAATGGAAAACAAAAGACGGCAGTTACG AAAATACGCAGTACGCCCAGTTCGACACCTTCATTGAAGGAATGTTCGAGAAGGGGCGACTGCTTGATATTATCAAGAAT TTTATCTGCTTCTCCGGCGACGCGAAGATTCTTGGTGCCTATCACCAATATTTTGCCGTGCGGAAGGCCATTACTTCCAC CGCCAAGGCAACCGAAACAGACGGGCGTGGCGGTGTTTTTTGGCATACGCAAGGCAGTGGCAAGTCATTGTCTATGGTAT TCTACGCCCATCTTTTACAGGAGATATTGAACTCCCCTACAATCGTTGTGCTGACCGACCGTAACGACCTTGACGATCAG CTGTTCGGGCAATTTGCAAAGTGTGCGGACTTCCTGCGCCAAACGCCCCAACAAGCCGAAAGCCGTATTCATTTAAAAGA GCTTCTCGCGGGGCGGCAAGCGAACGGTATTATCTTCACTACGATGCAAAAGTTTGAGGAATCCTCCGAAGCCCTCTCCG ACCGACGCAACATCATCGTTATGGCGGACGAGGCGCACCGTGGGCAATATGGACTTGAGGAAAAGGTGGATGCCAAGACA GGACGTGTTATCCTCGGTACGGCTCGGATTATCCGTGACAGCCTGCCAAATGCGACCTACATAGGATTTACTGGCACCCC CATCTCCTCGAAAGACCGCTCGACAATTGAGGTTTTCGGCAATTACATTGATATCTACGATATGACTCAAGCTGTGGAGG ACGGCGCAACTCGCCCGGTCTACTATGAGAGCCGGGTTATTCACTTGAAATTAGACGAGGATGTTTTGCAGCTAATCGAT GCCGAATACGACATTATGGGTGAGAATGCCGAACCATATGCCATAGAGAAAAGCAAAAAGGAACTTGGGCAGATGGAAAG CATCCTTGGTGCCGACCAGACGATAACTGCCCTGTGTGAGGACATCGTAAAGCATTATGAGGAAAACCGCCAGTATGAAC TGACTGGCAAGGCAATGATAGTTGCTTACTCTCGCCCGATTGCTATGAAGATTTACCATAAGATTCTTCAAATGCGTCCA GATTGGACAGAAAAACTTGGTGTGGTGATGACAAGCGGTAACAACGACCCTGAAGAATGGCGCGAGATCATCGGCAATAA GCGCCACAAAGACGAAATGGCGAAGAAGTTCAAGGATAATAACAGCCCCCTTAAAATCGCCATTGTGGTGGATATGTGGC TAACAGGATTCGATGTTCCGAGCCTTGCAACGATGTACGTTTACAAGCCGATGGCGGGTCATAATCTTATGCAGGCAATC GCACGCGTCAATCGCGTTTATAAGAATAAAGAAGGCGGCTTAGTGGTTGATTATGTTGGTATCGCGTCCGCGCTGAAACA GGCGATGAACGACTACACCAACCGTGATAAACAGAACTACGGGGAACAGGATATTGCCAAGACCGCCCTCCCGAAGTTTA TTGAAAAGTTGGAAGTTTGCCGTGACTTGTTCCATGGGTTTGACTACGCCGGCTTTATGGACGCGAAAGCTACAGACCTT GCCCGCGCCAAGGCAATCAGTGGCGGCGTAAACTTCCTGTCTGGTATAGATAAAGAAAAGCAGCGCGAGTCTTTCGTTAA AGAGGCTATGCTGCTCCGTCAGGCGTTGTCACTCTGTCGCTCACTCCTTAAGCCTGAACAGCGATTTGAAGCGGCATATT TTGAAGCAGTTCGGACTCTCCTAACCCGTATTACGGGCGAAGGTAAGCCGCTGTCCCTGAAAGAAATAAATGCCCGCGTC AACGAACTGTTAAAAGCGAGCATTCAGAGCGAAGGCGTTATAAACCTGTTTTCTGATATAGATACGGGGTTCTCGCTTTT CGACCCGAAGTTTCTCGAGGAAATCGCTAAGATGAAGGAACGCAACCTCGCGGTAGAAATCCTTAAAAAACTTCTCGCCG AGCAAGTATCGCTCTACCGTCGAACGAATCTTGTTAAGTCAGAAAAGTTTTCCGAAATGCTATCCCGTGCAATGAAAGCG TACTTGAACGGGATGCTTTCCAATGAGGAAGTTATTGCCGAACTAATGAAGATGGCAAAGGACATGGCAAACGCTCAAGC GGAGGGCGACGCGCTTGGACTGAATGATGAAGAGCTGGCATTCTATGATGCTCTGACTCGTCCCGAAGCAGTAAAGGATT TCTATCAAAATGAAGAACTTGTAGCAATGACTCATGAGCTTACCGATATGCTCCGCAAGAACCGCACTATCGACTGGCAG AAGAAAGAATCTGCTCGCGCCGGAATGCGACGCATGGTAAAGAAGCTGTTGAAAAAATATAAATACCCGCCTGATGGTAT GGAAGATGCAATCGCCACCGTAATTGGTCAGTGCGAGATGTGGGCAGATAACTAA Protein sequence : MPYTEANYENAVLEVFRDTLGYGYSYGPDVVRDYSDPLYTDELLPALRRVNSKLPEVALSEAVYKLRNFEGGTVLQKNVQ FMDYLQNGVSVNYYDKGEQRSALVQLVDFDNIKQNTFTVANQWTITENSEKRPDVIVFLNGLPVVVFELKSPSREETDAS EAYRQLRNYMKEIPSLFIYNAFLVMSDLATSKAGTITADEDRFMEWKTKDGSYENTQYAQFDTFIEGMFEKGRLLDIIKN FICFSGDAKILGAYHQYFAVRKAITSTAKATETDGRGGVFWHTQGSGKSLSMVFYAHLLQEILNSPTIVVLTDRNDLDDQ LFGQFAKCADFLRQTPQQAESRIHLKELLAGRQANGIIFTTMQKFEESSEALSDRRNIIVMADEAHRGQYGLEEKVDAKT GRVILGTARIIRDSLPNATYIGFTGTPISSKDRSTIEVFGNYIDIYDMTQAVEDGATRPVYYESRVIHLKLDEDVLQLID AEYDIMGENAEPYAIEKSKKELGQMESILGADQTITALCEDIVKHYEENRQYELTGKAMIVAYSRPIAMKIYHKILQMRP DWTEKLGVVMTSGNNDPEEWREIIGNKRHKDEMAKKFKDNNSPLKIAIVVDMWLTGFDVPSLATMYVYKPMAGHNLMQAI ARVNRVYKNKEGGLVVDYVGIASALKQAMNDYTNRDKQNYGEQDIAKTALPKFIEKLEVCRDLFHGFDYAGFMDAKATDL ARAKAISGGVNFLSGIDKEKQRESFVKEAMLLRQALSLCRSLLKPEQRFEAAYFEAVRTLLTRITGEGKPLSLKEINARV NELLKASIQSEGVINLFSDIDTGFSLFDPKFLEEIAKMKERNLAVEILKKLLAEQVSLYRRTNLVKSEKFSEMLSRAMKA YLNGMLSNEEVIAELMKMAKDMANAQAEGDALGLNDEELAFYDALTRPEAVKDFYQNEELVAMTHELTDMLRKNRTIDWQ KKESARAGMRRMVKKLLKKYKYPPDGMEDAIATVIGQCEMWADN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 3e-167 | 42 |
