Gene Information

Name : Desru_3570 (Desru_3570)
Accession : YP_004547059.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 3616505 - 3618451 bp
Length : 1947 bp
Strand : -
Note : KEGG: thx:Thet_1675 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase

DNA sequence :
TTGGTGGATCAAATAAAAACACTCTTCTTGGACTTGGAAACATTTTCGTCCATAGACCTCGCCAAAAGCGGGGTCTATCG
CTATGCTGAGTCCCCGGACTTTGAAATCCTGTTGTTCGGTTACAGTGTTGACGGCGGAGGTGTTCAGGTTATTGATCTGG
CCAGCGGTGAACATCTGCCAGATGAGATTTACAGCGCCCTTTTAGATGAATCCGTTATCAAATGGGCACATAATGCGCAG
TTTGAACGGGTATGCCTGTCCCGCTATCTTAACCAGTGGCTGAAACCAAATTCCTGGCGCTGCACCATGGTCTGGTCCGC
CTATCTTGGTCTGCCTTTATCGCTGGAGGGTGCTGCGTTGGTCACCGGCGCGGAAAAGCAAAAGCTGATCGAGGGGAAAG
ATCTAATCCGCTACTTCTCCATGCCCTGCAAGCCCACAAAAACAAACGGCCAGCGAACACGTAATCTCCCCGAACACGAC
CCTGAAAGGTGGGAACGCTTCAAAGCCTACAATGCCCGCGATGTGGAAACGGAAATGGCAATACAGGCAAAGCTGGCGAA
CTTCCCCGTACCGGAGGATGAGTGGAAAAACTATATCCTCGACCAGGAAATCAATGACCGAGGTATCCTTCTGGACATGA
CCCTGGTCAGGCAGGCGATCCGCTGCGATGAGCAATCCCGGTCGGAACTGACGCGAGTTATGCAAGAGCTGACCGCACTG
GATAATCCCAACTCAGTCGTGCAGATGAAGTCCTGGCTCGCTGATCATGGTCTTGAAACAGACACGTTGGACAAGGCCAC
GGTTAAGGAACTGCTTAAGACCGCACCCGGAAATCTGGGACGTGTTTTAGAATTACGGCAGAAGCTAGCCAAGTCCAGTA
TAAAGAAATACACAGGCATGGAAAACGCAGTCTGCTCCGACGGCAGGGCGCGCGGGTTGCTGCAGTTCTACGGAGCTAAT
CGTACCGGGCGTTTTGCTGGGCGGTTGATTCAAGTACAAAACCTTCCGCAAAACCATCTACCAGATTTGGAGGAAGCGCG
CAATCTTATTCGCTCCGGGCAATTTGATGCAGCAGAGATGCTCTATGATTCTGTGCCCTCCGTTTTATCCGAACTTATCC
GTACCGCATTCATCCCCCAATCTGGATTCAAATTTATCGTTGCTGACTTTTCCGCCATTGAAGCCAGGGTAATAGCCTGG
TTGGCGGGTGAAACTTGGCGTAATGAGGTATTTGCCACCCACGGCAAGATTTATGAAGCATCGGCGGCGCAGATATTCCA
TGTCCCCATTGAAGAGGTCACCAAAGGCAGCCCGCTGCGCCAGAAAGGGAAAATAGCCGAATTGGCGCTTGGCTACGGCG
GATCAGTCGGCGCTTTAACCGCTATGGGCGCTCTTGATATGGGGCTTACTGAGGATGAACTCCAGCCGCTAGTAACCGCC
TGGCGAAAGGCTAATCCCAATATCGTCCGGTTCTGGTGGGACGTTGACCGGGCTGCGAAAAGGGCGGTCAAGGATCGCGT
CACTACGGAAACACACGGAATCCGTATTGGGTACCGTAGCGGAATGCTATTCATCACCTTGCCATCCGGCAGGAACCTTT
ACTATGTAAAGCCCCGAATAGAATTAAACCGCTTCGGCAGCGAATCGGTGACATATGAGGGTATTGGTGCCGCAAAAAAA
TGGGAACGCATCGAAAGCTACGGGCCTAAGTTTGTTGAGAACATTGTACAGGCAGCATCCAGGGATATCCTTTGTTATGC
CATGCGCCGTTTGGATGCCTTGGGCTACAACATAGTGATGCATGTTCATGACGAGGTTGTGATTGAAGCCCCGGCTCGGG
CATCGGTTGATGATATCTGCACCGTCATGAGTGAGTCCCCAACTTGGGCAAAGGGGCTTTTGCTTCGCGCCGATGGCTTT
GAGTGCCAGTTCTATAAAAAAGATTAG

Protein sequence :
MVDQIKTLFLDLETFSSIDLAKSGVYRYAESPDFEILLFGYSVDGGGVQVIDLASGEHLPDEIYSALLDESVIKWAHNAQ
FERVCLSRYLNQWLKPNSWRCTMVWSAYLGLPLSLEGAALVTGAEKQKLIEGKDLIRYFSMPCKPTKTNGQRTRNLPEHD
PERWERFKAYNARDVETEMAIQAKLANFPVPEDEWKNYILDQEINDRGILLDMTLVRQAIRCDEQSRSELTRVMQELTAL
DNPNSVVQMKSWLADHGLETDTLDKATVKELLKTAPGNLGRVLELRQKLAKSSIKKYTGMENAVCSDGRARGLLQFYGAN
RTGRFAGRLIQVQNLPQNHLPDLEEARNLIRSGQFDAAEMLYDSVPSVLSELIRTAFIPQSGFKFIVADFSAIEARVIAW
LAGETWRNEVFATHGKIYEASAAQIFHVPIEEVTKGSPLRQKGKIAELALGYGGSVGALTAMGALDMGLTEDELQPLVTA
WRKANPNIVRFWWDVDRAAKRAVKDRVTTETHGIRIGYRSGMLFITLPSGRNLYYVKPRIELNRFGSESVTYEGIGAAKK
WERIESYGPKFVENIVQAASRDILCYAMRRLDALGYNIVMHVHDEVVIEAPARASVDDICTVMSESPTWAKGLLLRADGF
ECQFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 2e-164 54
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 2e-154 51
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 2e-154 51