Gene Information

Name : Desru_3313 (Desru_3313)
Accession : YP_004546804.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3371545 - 3372243 bp
Length : 699 bp
Strand : -
Note : KEGG: drm:Dred_0707 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCCCAAAATTCTGGTTGTGGATGATGAACTGCCAATCCGTGAATTGGTCAAGTATAATCTGGAACGGGAGGGTTTTCA
GGTTTTACTGGCTGAAGAGGGAAACAGCGGGGTAGAACTGGCTAGAAAAGAAACCCCCGACCTCATTGTGCTGGACATTA
TGCTGCCCGGACAGGATGGTCTGGCGGTTTGCCGCGCGTTGCATCAGGAAGAAGTCACCCGTTCCATTCCCATCATTATG
CTCAGCGCCCGGGGAGAAGAATTGGACAAAGTGCTGGGACTGGAAATGGGGGCGGACGACTATATGACCAAGCCCTTCAG
TCCCAGAGAATTAATTGCCAGGATCAAAGCGCGGCTGCGCCGGAATACCGGGGATACCACAGTAACGGAGGAATCGGGCC
GAATTGCGGTGGGCAAACTGGTGATCGATCAGGACCGCTTTATGGTTTCGGTAAACGGCGTGAAACAGGATCTCACGCCC
AAAGAGTTCGAACTGCTGCGTTATTTGGCCAGGCACCCCGGAAAGGTTTTTACCCGGGATTTTCTACTGGAGCAGATTTG
GGGCTATGATTTTGCCGGGGATTCCCGGACGGTGGATGTTCACATCCGTCATATCCGCCAGAAGCTGGAGCAGATTGCCG
GAGCTCCCCAGTTTATTGAGACGGTCCGGGGAGTGGGCTATCGTTTTAAGGAGGCTTAA

Protein sequence : 
MPKILVVDDELPIRELVKYNLEREGFQVLLAEEGNSGVELARKETPDLIVLDIMLPGQDGLAVCRALHQEEVTRSIPIIM
LSARGEELDKVLGLEMGADDYMTKPFSPRELIARIKARLRRNTGDTTVTEESGRIAVGKLVIDQDRFMVSVNGVKQDLTP
KEFELLRYLARHPGKVFTRDFLLEQIWGYDFAGDSRTVDVHIRHIRQKLEQIAGAPQFIETVRGVGYRFKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-44 46
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-45 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_3313 YP_004546804.1 response regulator receiver HE999704.1.gene2815. Protein 1e-58 54
Desru_3313 YP_004546804.1 response regulator receiver NC_002952.2859905.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_003923.1003749.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_002758.1121668.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_007622.3794472.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_009641.5332272.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_013450.8614421.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_007793.3914279.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_002745.1124361.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_009782.5559369.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_002951.3237708.p0 Protein 1e-55 52
Desru_3313 YP_004546804.1 response regulator receiver NC_012469.1.7686381. Protein 1e-51 51
Desru_3313 YP_004546804.1 response regulator receiver AE016830.1.gene1681. Protein 9e-54 50
Desru_3313 YP_004546804.1 response regulator receiver NC_012469.1.7685629. Protein 5e-50 50
Desru_3313 YP_004546804.1 response regulator receiver AE000516.2.gene3505. Protein 5e-41 45
Desru_3313 YP_004546804.1 response regulator receiver BAC0039 Protein 5e-42 43
Desru_3313 YP_004546804.1 response regulator receiver CP001138.1.gene2239. Protein 2e-41 43
Desru_3313 YP_004546804.1 response regulator receiver CP000034.1.gene2186. Protein 5e-42 43
Desru_3313 YP_004546804.1 response regulator receiver NC_002695.1.916589.p Protein 4e-42 43
Desru_3313 YP_004546804.1 response regulator receiver BAC0596 Protein 2e-41 43
Desru_3313 YP_004546804.1 response regulator receiver NC_014475.1.orf0.gen Protein 9e-42 42
Desru_3313 YP_004546804.1 response regulator receiver NC_005054.2598277.p0 Protein 9e-42 42
Desru_3313 YP_004546804.1 response regulator receiver CP000647.1.gene2531. Protein 2e-41 42
Desru_3313 YP_004546804.1 response regulator receiver CP001918.1.gene3444. Protein 6e-40 42
Desru_3313 YP_004546804.1 response regulator receiver NC_002951.3238224.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_007793.3914065.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_002758.1121390.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_010079.5776364.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_002952.2859858.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_007622.3794948.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_003923.1003417.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver NC_013450.8614146.p0 Protein 2e-37 41
Desru_3313 YP_004546804.1 response regulator receiver CP000034.1.gene3834. Protein 1e-32 41
Desru_3313 YP_004546804.1 response regulator receiver CP001138.1.gene4273. Protein 1e-32 41
Desru_3313 YP_004546804.1 response regulator receiver CP004022.1.gene3215. Protein 4e-35 41
Desru_3313 YP_004546804.1 response regulator receiver NC_002695.1.915041.p Protein 1e-32 41
Desru_3313 YP_004546804.1 response regulator receiver AF155139.2.orf0.gene Protein 2e-41 41
Desru_3313 YP_004546804.1 response regulator receiver AF162694.1.orf4.gene Protein 2e-34 41
Desru_3313 YP_004546804.1 response regulator receiver CP000034.1.gene3671. Protein 3e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_3313 YP_004546804.1 response regulator receiver VFG1563 Protein 1e-44 46
Desru_3313 YP_004546804.1 response regulator receiver VFG1702 Protein 3e-45 46
Desru_3313 YP_004546804.1 response regulator receiver VFG1389 Protein 5e-35 46
Desru_3313 YP_004546804.1 response regulator receiver VFG0596 Protein 2e-31 41