Gene Information

Name : Desru_3237 (Desru_3237)
Accession : YP_004546729.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 3294189 - 3294995 bp
Length : 807 bp
Strand : -
Note : manually curated; PFAM: ABC transporter related; KEGG: bay:RBAM_031050 opuBA; SMART: AAA ATPase

DNA sequence : 
GTGGCAACGGTATTACGCTTTGAAAAAGCTAGCAAAATATATGATGGAGGAAGGGCGGCTGTGGCGGAGGTTTCGCTGGA
AGTACAGGCCGGGGAAACCCTGGCGCTGATCGGGCCTTCCGGATGCGGCAAAACCACCCTGCTGAAAATGGTGAACCGCC
TGGTGGAAAAAACCGGGGGACGAATCCTGGTAGAGGGCAGGGAAGTGGCCCAATGGGACCCGATCCAATTGAGGCGCAGC
ATCGGGTATGTTATCCAGCAGATTGGTCTGCTGCCTCACCTAACCGTTGAAAAGAATCTTGGTTATGTCCTGAAGATCAT
GGGACGATCCCCAAGCCAATGTCGGCAGCGGGCGGAGGAACTTCTGGAACTGGTGGGATTGCCCCTGGAGCTTCTCAAAA
GATATCCCGGGGAACTGAGCGGCGGGCAGCAGCAGCGGATTGGAGTGGCCAGGGCTTTAGCGGCGGATCCCCGGATGATC
CTGATGGACGAGCCCTTTGGAGCCATTGACCAGATCACCCGGAATCAACTGCAGGATGAACTGCTGAAACTCCAAGCAAG
ACTGAGCAAAACCATTATCTTAGTTACCCACGATATTCAGGAAGCAATAAAATTGGCCGACCGCATTGCCATCATGAGGG
AAGGGCGGCTGGAGCAGGTGGGAACCTTTAAGGAACTGACGGCTTCTCCTGCCAATGATTTTGTGGAGCTTTTCCTGCAA
GCCAACTGCCCCTACGATTCCCGGAGCCGCCACCGGCAGAAAAGGGCCGCCTCCGGTAAAGTGCAGCCGGTAAGGATTGT
GAAATAA

Protein sequence : 
MATVLRFEKASKIYDGGRAAVAEVSLEVQAGETLALIGPSGCGKTTLLKMVNRLVEKTGGRILVEGREVAQWDPIQLRRS
IGYVIQQIGLLPHLTVEKNLGYVLKIMGRSPSQCRQRAEELLELVGLPLELLKRYPGELSGGQQQRIGVARALAADPRMI
LMDEPFGAIDQITRNQLQDELLKLQARLSKTIILVTHDIQEAIKLADRIAIMREGRLEQVGTFKELTASPANDFVELFLQ
ANCPYDSRSRHRQKRAASGKVQPVRIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-51 53
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-52 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_3237 YP_004546729.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-21 41