Gene Information

Name : Desru_3176 (Desru_3176)
Accession : YP_004546673.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3234374 - 3235048 bp
Length : 675 bp
Strand : -
Note : KEGG: drm:Dred_0759 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGGGCGCCAGAATTCTGGTGATTGACGATGATCCAAAAATTACAGCCATGCTGCAGAGGGCCTTGGTTTTTGAAGGCTA
CCGGGTGGACGTGGCCAACGACGGATATACCGGATTGCAAATGGCAAGAAATAATCCTCCGGAATTATTGATTCTGGATA
TAATGATGCCGGGCCTGGACGGTTGGGAATTTTGCCAGCGTTTTCGCAAGGATAATGTGATTCCTATTTTAATTCTCAGT
GCCAAAGACGAAGTGGAAAGCCGGGTGAAGGGACTCAATCTAGGGGCCGATGATTATCTGGTTAAACCCTTTGCTCTGGA
GGAATTGCTGGCCCGTATTCAGGCCCTTCTGCGCCGCAGGGCCATATCCGATCAGGTTCTCCAGTTTGCAGATTTAAAAA
TAGACCTGGAAACCAGGGAGGTACGGAGAGCGGGGCAATTCCTTGCCCTGACGGCCAAAGAATTTGATTTGCTGCAGCTT
TTTATGAGCAATCCCAATCAGGTGTTGCTCAAAGACCGAATTATCGACCGGGTATGGGGCATCGACTACACCGGTGGTTC
CAATGTTTTAGAGGTATATGTTAACATGCTCCGGCAGAAATTAGAGACAGGCGGGGCGTCCAGGCTGATTCACACGGTGC
GGGGCGCCGGATATGTTCTGAAGGAGCAAAAATAA

Protein sequence : 
MGARILVIDDDPKITAMLQRALVFEGYRVDVANDGYTGLQMARNNPPELLILDIMMPGLDGWEFCQRFRKDNVIPILILS
AKDEVESRVKGLNLGADDYLVKPFALEELLARIQALLRRRAISDQVLQFADLKIDLETREVRRAGQFLALTAKEFDLLQL
FMSNPNQVLLKDRIIDRVWGIDYTGGSNVLEVYVNMLRQKLETGGASRLIHTVRGAGYVLKEQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_3176 YP_004546673.1 response regulator receiver BAC0083 Protein 8e-39 45
Desru_3176 YP_004546673.1 response regulator receiver BAC0638 Protein 4e-33 45
Desru_3176 YP_004546673.1 response regulator receiver BAC0197 Protein 4e-40 45
Desru_3176 YP_004546673.1 response regulator receiver BAC0125 Protein 1e-39 44
Desru_3176 YP_004546673.1 response regulator receiver AE015929.1.gene1106. Protein 4e-30 43
Desru_3176 YP_004546673.1 response regulator receiver BAC0308 Protein 8e-36 43
Desru_3176 YP_004546673.1 response regulator receiver HE999704.1.gene1528. Protein 4e-35 42
Desru_3176 YP_004546673.1 response regulator receiver AF155139.2.orf0.gene Protein 3e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_3176 YP_004546673.1 response regulator receiver VFG1390 Protein 4e-47 52
Desru_3176 YP_004546673.1 response regulator receiver VFG1386 Protein 4e-40 45
Desru_3176 YP_004546673.1 response regulator receiver VFG0596 Protein 3e-32 42
Desru_3176 YP_004546673.1 response regulator receiver VFG1389 Protein 2e-33 42