Gene Information

Name : Desru_3032 (Desru_3032)
Accession : YP_004546529.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3104672 - 3105562 bp
Length : 891 bp
Strand : -
Note : KEGG: drm:Dred_1099 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGGAACGTTGGTTGGAAGAGTTCATTCATTATCTGGCAGTTGAGAGGGGTTTAGCCCAAAATACCCTGGCCTCCTACCG
AATAGATCTTAGCCAATATTTGTCGCATTTAAAAAAGCAAGGGGCCTCTTCTTTAAATCAAGCCGATCGCAACCAAATAT
TGTCCCACCTTTACAAATTGCAGAAGAGCGGCAAAGCTCCCGCTACCATCTCCCGTCACATTGCGGCGCTGAAGCATTTT
TACCGCTTTCTGCTGGCGGAGGGGTTGATCTCCGAGGATCCCACGGCAACTCTGGAGGCTCCTAAGCTGGCGCAGCGTTT
ACCTAAGATCTTGTCCACTGCCGAGGTGGAAATCTTACTCAGCCAACCCCAACTGGCAGATCCCGCCGGCATGAGAGACA
AAGCCATGCTGGAATTAATTTATGCTACCGGCATTCGTGTTTCGGAAATGGTGGCCTTAGATATTGAGCATATACAATTG
GATATGGGATATATTCGCTGCTTTGGCAAAGGTTCTAAAGAGCGGATTATTCCCCTGGGGTCGGTGGCTGCCCATTATGT
CCGGGAATACCTGGCCTGGGCAAGGGTCAGACTAACCAAAGGCAAGCTGGAGCACCAGGCCCTTTTTGTAAATGTCCAGG
GTAAAAGGTTAACCCGCCAGGGCTTTTGGAAAATCACCAAAAAGTACGCCCGGGAAGGGAAGATTAATAAACCCATTACT
CCCCACACCCTGCGTCATTCCTTTGCCACACACCTGCTGGAAAATGGTGCGGATTTGAGATCGGTTCAGGAAATGCTGGG
GCATGCGGATATCTCCACCACCCAAATCTACACCCATCTAACCAAGATCCGTTTAAAAGAAGTCTATACCCAGTCCCACC
CAAGAGCATAA

Protein sequence :
MERWLEEFIHYLAVERGLAQNTLASYRIDLSQYLSHLKKQGASSLNQADRNQILSHLYKLQKSGKAPATISRHIAALKHF
YRFLLAEGLISEDPTATLEAPKLAQRLPKILSTAEVEILLSQPQLADPAGMRDKAMLELIYATGIRVSEMVALDIEHIQL
DMGYIRCFGKGSKERIIPLGSVAAHYVREYLAWARVRLTKGKLEHQALFVNVQGKRLTRQGFWKITKKYAREGKINKPIT
PHTLRHSFATHLLENGADLRSVQEMLGHADISTTQIYTHLTKIRLKEVYTQSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-56 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-56 44