Gene Information

Name : Desru_2979 (Desru_2979)
Accession : YP_004546478.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 3040858 - 3043020 bp
Length : 2163 bp
Strand : -
Note : KEGG: drm:Dred_1124 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold

DNA sequence :
ATGCAGAATGATTCAAGCATGTTCAGGCAAATCGCCCGGGAACTGGCAGTGGGCTTGGGGCAGGTTGAACAAACGGCCCG
GCTTTTGGATGAGGGAAACACCATTCCCTTCATTGCCCGCTATCGCAAAGAAGTAACCGGAGAACTGGATGAGGTGCAGA
TTCGTAAAATAGACGAAAGGCTTACCTCCCTCCGCAACCTGGCGAAACGGAAGGAAGAGGTTATTCATTCCATTGAGGAG
CAAGGCAAGCTGACCCTTGAGTTAAAGGAAGCCATTCTGGCTGCGGAAACGGTTACGGCAGTGGAGGACCTGTATCAGCC
TTACCGGCCTAAGCGGAAAACCCGGGCCAGCGTGGCCAGGGAACAGGGGTTGGAGCCGCTGGCCCAGTGGCTGCTCACGG
TGCAGGAAGGGGCGCTTCCTCTGCAGGAAGCCCAATCTTATATCCAGGCCGACCTGGGTGTGGGCAGTGCCGAAGAGGCC
CTGCAGGGGGCCATGGACATTATTGCGGAAATGGTTTCCGATGAGCCGGAAACCCGGGGCTGGGTCCGGGAGATTACCTT
TCAGCGGGGGGAATTGGTTACCGAGGTTAAGGACGAGAGCAAGGATCCCCGGGGGGTTTACCGCATGTATTACGAGCACC
GGGAACCGGTTAAATCCGTTCCGCCCCACCGGGCGCTGGCCATTAACCGGGGTGAAAGGGAAGAGGTTTTAAAGGTAAGG
CTGGAAGTAACTGAGGAAATGATCCTGGGACGTCTTAACCAACGCTGGATACCGGCCCGTTCGGGAGCCGCGGAAGTATT
GCAGGAAGCGGTCAAGGACGGTTACCGCAGACTGCTGGCCCCGTCCCTGGAACGGGATATTCGCAATCGTTTAACCGAAG
CCGGGGAGGAACAGGCCATCAATGTATTTTCCAAAAATCTGCGGCAGTTGCTGCTGCAGCCGCCGGTTAAAGGGAAAGTG
GTGCTGGGATTGGATCCGGCTTACCGAACCGGCTGCAAGTGGGCGGTGGTGGACGATACCGGGAAAATGCTGGAGGTGGG
GGTTTTTTATCCCACTCCCCCGCAAAAGAAGATTGTTGAAGCCAGCCGCGAAGTCAGCCGTCTGGTAAGTCAATACGGCG
TGGATATTATCGCCATTGGCAACGGCACCGCTTCCCGGGAAACAGAACAATTTGTGGCGGATTTAATCCGTCAGGAAGGC
TGGCAGCAGATTCAGTATATTATTGTCAATGAGGCCGGAGCCAGCGTCTATTCCGCTTCGGAACTGGCAGCCAAAGAATT
CCCCGGGCTGGATGTGGCCCAGCGCAGTGCCGCTTCCATTGCCCGGCGTCTGCAGGACCCTTTGGCCGAACTGGTAAAGA
TTGAACCCCGCTCCATTGGAGTCGGGCAGTATCAGCATGATGTGGCGCCTAAAAAACTGGAAGACAGCCTTAAAGGAGTG
GTTGAATCGGCCGTTAACCTGGTGGGGGTTGATTTGAACACCGCTTCCCCGTCTCTTTTATCCTACGTTTCGGGAATCAA
TGCCGCGGTGGCGGTGAATATTGTTAAATACCGGGAAGAAAACGGCAGCTTTAGTGAACGAACCCAACTCAAAAAAGTAC
CCCGACTAGGTCCCAAAGCCTTTGAACAAAGCGTTGGTTTTTTGCGTATTCCGGAGGGCGCCAAGCCCTTAGACCGGACG
GGAATCCATCCTGAATCCTACCCGGTGGTAAAGAAGCTGCTGCGCCAAATCGGTCTCCGTGAACAGGATATCGGAACGCC
GGAAATCCGCGAGCAACTGTCCCGGGTTAATTGCGAAGAAATGGCAGAGGCGCTGGAAACAGGGGCGCCGACCCTGCGGG
ATATTATTGACGGGCTGCTGCGGCCCGGAAGAGATCCCCGGGAAGATCTGCCGGGCCCCCTTTTCCGGACGGATATTTTA
AAAATTGAGGATTTAAAATGCGGCATGGAATTGAAAGGAACCGTACGGAACGTAGTGGATTTTGGAGTTTTTGTGGACAT
CGGTTTAAAAAATGACGGTATGGTTCACCGCTCAGAACTGGGGAACTCTCGGTTCCGGCATCCCCTGGATGTGGTCTCGG
TGGGCGATGTGGTGGATGTTCGCGTTTTGTCCGTGGATGTAGAGCGGGGGCGGGTGGCCTTAACCATGAAGAAGGAGTCC
TAA

Protein sequence :
MQNDSSMFRQIARELAVGLGQVEQTARLLDEGNTIPFIARYRKEVTGELDEVQIRKIDERLTSLRNLAKRKEEVIHSIEE
QGKLTLELKEAILAAETVTAVEDLYQPYRPKRKTRASVAREQGLEPLAQWLLTVQEGALPLQEAQSYIQADLGVGSAEEA
LQGAMDIIAEMVSDEPETRGWVREITFQRGELVTEVKDESKDPRGVYRMYYEHREPVKSVPPHRALAINRGEREEVLKVR
LEVTEEMILGRLNQRWIPARSGAAEVLQEAVKDGYRRLLAPSLERDIRNRLTEAGEEQAINVFSKNLRQLLLQPPVKGKV
VLGLDPAYRTGCKWAVVDDTGKMLEVGVFYPTPPQKKIVEASREVSRLVSQYGVDIIAIGNGTASRETEQFVADLIRQEG
WQQIQYIIVNEAGASVYSASELAAKEFPGLDVAQRSAASIARRLQDPLAELVKIEPRSIGVGQYQHDVAPKKLEDSLKGV
VESAVNLVGVDLNTASPSLLSYVSGINAAVAVNIVKYREENGSFSERTQLKKVPRLGPKAFEQSVGFLRIPEGAKPLDRT
GIHPESYPVVKKLLRQIGLREQDIGTPEIREQLSRVNCEEMAEALETGAPTLRDIIDGLLRPGRDPREDLPGPLFRTDIL
KIEDLKCGMELKGTVRNVVDFGVFVDIGLKNDGMVHRSELGNSRFRHPLDVVSVGDVVDVRVLSVDVERGRVALTMKKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 9e-138 48