Gene Information

Name : Desru_0263 (Desru_0263)
Accession : YP_004543846.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 266184 - 268631 bp
Length : 2448 bp
Strand : +
Note : KEGG: drm:Dred_0180 ATPase; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTTCACCGATTTACAGAAAGTGCGAAAAATGTTCTCATTCTGGCCCAGGAAGAAGCCAGGAGATTAAAATACCCCTT
AATTGGGACCGAACATATTCTGCTGGGATTGATTCGCGAGGATCAAGGTTTTGCCGCCAGGGCGCTGGAGCAAATGGGGA
TCAGCGCCGACCGGGTTGCCCAGGCGGTGGAGCAGGTAGTGGGCGTGGGAGATCAAGCGGTTCCGGCGGAAATCCCGGCC
ACAGCCCGGGCCAAGAGGGTACTGGAACTGGCGGTGGAAGAAGCCCGCAGCCTGAATCATAATTATGTGGGCACCGAACA
TATTCTGCTTGGATTGATTCGTGAGGGGGAAGGCGTGGCGGCTCAGGTATTAATCTCCCTGGGAGCGGACATGGAACGGG
CCCGCCAGCAGGTTATCAGCATGATGGGAGGCTCCCCCGGCGGCGGACAGCCCCAGGGCGGTCCGGGCCATCATTGTCCC
TCCGGCGGATGTAAGACGGTGAGTCTGGATCAGTTCAGCCGGGACTTAACCTCCCTGGCCAAGGAAGATAAACTGGATCC
GGTGGTGGGCCGGGGCAAGGAAATCGAGCGGGTTATCCAGGTGTTGTCCCGCCGGACCAAGAACAATCCTGTCCTGATCG
GGGAGCCCGGTGTGGGTAAAACCGCCATCGCCGAAGGGCTGGCCCAGAAAATTATCGAGGGCAGCGTACCGGAGATCTTA
TTAAACCGCCGGGTGGTGACCCTTGATCTGGCCGGTATGGTGGCCGGCACCAAATATCGGGGCGAGTTTGAAGACCGGCT
GAAAAAGGTTATGGAAGAGATCCGGCAGGCCGGAAATATTATTGTGTTTATTGATGAACTGCATACCTTAATCGGTGCCG
GGGCGGCAGAAGGGGCCATTGATGCGGCCAATATCTTAAAACCGGCCCTGGCCCGGGGCGAAATTCAAACCATCGGGGCC
ACCACCCTGGATGAATACCGCAAGTATATTGAAAAGGATTCGGCACTGGAACGCCGCTTTCAGCCCATTCAGGTGGATGA
ACCCACGGTGGAGGAAACCATCCAGATCTTAAAGGGCATCCGGGATAAATACGAGGCGCACCACCGGGTCAATATTACCA
ATGAGGCCCTGGAAGCCGCCGCCAGATTGTCGGACCGCTACATTACCGATCGCTTTCTGCCGGATAAGGCCATTGATTTA
ATTGATGAGTCCGCCTCCCGGGTTCGCATTAAAGCCTTTACCACACCTCCGGACCTAAAGGACAAAGAAAAGCTGCTGGT
GGAAGTGCGCAAGGAAAAGGAAGCGGCCATCAATAATCAGGAGTTTGAAAAAGCCGCAGAACTGCGGGACCGTGAACAAA
AGCTGACTTTGCAATTAAATCAGGCCCGGGAGAGCTGGAACCAGGCCAAGGGTGGCGACGGATTGATTGTTTCCGAGGAG
GATATTGCCCATATTGTAGCTGCCTGGACCGGTGTGCCGGTAAAAAAATTAGCCCAGGAGGAGTCCCAGCGGCTGCTGAA
CCTGGAAGAGGCCTTACACCAGCGGGTGATTGGCCAGGACGAGGCGGTAAAAGCGGTAGCCAGAGCGGTGCGCAGGGCCC
GGGCGGGCCTGAAGGACCCGAAGCGTCCGGTAGGTTCCTTTATCTTTCTGGGTCCTACCGGCGTGGGTAAAACCGAGCTG
GCCAGGGCGTTGGCGGAAGCCCTTTTTGGTGACGAAGATGCTTTAGTTCGCATTGATATGTCCGAATATATGGAAAAGCA
TGCTGTTTCTCGACTGGTAGGAGCGCCTCCGGGGTATGTGGGGTACGATGAAGGAGGCCAATTGACGGAGGCCGTTCGCA
GGAAACCCTATTCCGTGGTGCTGCTGGACGAAATTGAAAAGGCCCACCCGGATGTATTTAATATTTTGCTGCAGGTGCTG
GAAGACGGGCGGTTGACCGATTCCAAGGGGCGCGTGGTGGATATGCGCAATACGGTCATTATTATGACCTCCAACATTGG
GCTTTCCACTCTGAAGGCTACCGGGAAGGTGGGTTTTGCCGCATCGGCGGATCAATCCCGGGCGGAATATGAAAAGATGA
AGGAACGGGTGGAAGAAGCCCTGAAACGAACATTCCGGCCGGAATTTTTAAACCGCATTGATGAAAGCATTGTCTTCCAC
TCCTTAAGCCGGGAGCACATTAAGGAGATTGTCAACTTAATGCTGAAAGAAGTTACCAAGCGGATGGAAGATCCGGAAGT
ATACCTGGAGTTTTCCGAAGCGGCCCGGGAGCGGCTGGCTGAAACAGGCTACAGTGAGGAATTCGGGGCCAGACCGCTGC
GCCGGGAGATTCAGCGCAAAGTGGAAGACCGTTTGTCCGAAGAATTACTCCGCGGCACCTTCCAAAAAGGGGATAAGGTG
GCGGTGGATGTTCAGGAAGGTGAATTTACCTTTAACCCTGTGAAGTAA

Protein sequence :
MFHRFTESAKNVLILAQEEARRLKYPLIGTEHILLGLIREDQGFAARALEQMGISADRVAQAVEQVVGVGDQAVPAEIPA
TARAKRVLELAVEEARSLNHNYVGTEHILLGLIREGEGVAAQVLISLGADMERARQQVISMMGGSPGGGQPQGGPGHHCP
SGGCKTVSLDQFSRDLTSLAKEDKLDPVVGRGKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIEGSVPEIL
LNRRVVTLDLAGMVAGTKYRGEFEDRLKKVMEEIRQAGNIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEIQTIGA
TTLDEYRKYIEKDSALERRFQPIQVDEPTVEETIQILKGIRDKYEAHHRVNITNEALEAAARLSDRYITDRFLPDKAIDL
IDESASRVRIKAFTTPPDLKDKEKLLVEVRKEKEAAINNQEFEKAAELRDREQKLTLQLNQARESWNQAKGGDGLIVSEE
DIAHIVAAWTGVPVKKLAQEESQRLLNLEEALHQRVIGQDEAVKAVARAVRRARAGLKDPKRPVGSFIFLGPTGVGKTEL
ARALAEALFGDEDALVRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVL
EDGRLTDSKGRVVDMRNTVIIMTSNIGLSTLKATGKVGFAASADQSRAEYEKMKERVEEALKRTFRPEFLNRIDESIVFH
SLSREHIKEIVNLMLKEVTKRMEDPEVYLEFSEAARERLAETGYSEEFGARPLRREIQRKVEDRLSEELLRGTFQKGDKV
AVDVQEGEFTFNPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0263 YP_004543846.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 66
Desru_0263 YP_004543846.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 7e-142 51