Gene Information

Name : Desru_2551 (Desru_2551)
Accession : YP_004546065.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2602831 - 2603520 bp
Length : 690 bp
Strand : -
Note : KEGG: pjd:Pjdr2_2128 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
GTGAAGAGGATACTAATCATTGAAGATGAATTAAGCATTGCTGAACTGATGCGAGATTATCTGGAAATTAATGGGTTATC
CGTTGACATTGAACAAAACGGCCAGAGAGGGTTGCAAATGGCCGGGGAGGGCGGTTATGACCTGGTTCTTTTGGATTTGC
TGCTTCCAGGAATGGACGGGTTTGAAATCTGCAGGCAAATCCGCAGCAAACAGGATATACCCATCCTCATGGTTTCCGCG
AAGCAGGAGGAGATTGATAAAATTAGGGGACTGGGTCTGGGCGCTGACGATTATGTCACTAAACCTTTCAGTCCCAGTGA
ATTGGTGGCGAGGGTGAAAGCCCATTTATCCAGGTATGAACGGCTGACGGGAACACGGGAAGAAGAAAAGGATGAGATCA
TTATAAGAAACCTTATCATTGATAAAAGCTCTCGAAGAGTTTATAGAAGCGGACGGGAAGTCAGCATGACCAGCAAGGAG
TTTAACCTGCTGCTGCTGTTGGCCTCTAACCCTAACCGGGTTTTTAGCAAGGAGGATATTTTTGATCGCATCTGGGGTAT
GGATTCAGCGGGGAACATGGCCACTGTAACCGTGCATATCCGCAAAATCAGGGAAAAGATTGAAATAGATCCTGCCAATC
CACAATATATTGAGACCATCTGGGGGGTCGGCTACCGGTTTGCAGTTTAA

Protein sequence : 
MKRILIIEDELSIAELMRDYLEINGLSVDIEQNGQRGLQMAGEGGYDLVLLDLLLPGMDGFEICRQIRSKQDIPILMVSA
KQEEIDKIRGLGLGADDYVTKPFSPSELVARVKAHLSRYERLTGTREEEKDEIIIRNLIIDKSSRRVYRSGREVSMTSKE
FNLLLLLASNPNRVFSKEDIFDRIWGMDSAGNMATVTVHIRKIREKIEIDPANPQYIETIWGVGYRFAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 8e-24 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-33 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_2551 YP_004546065.1 response regulator receiver HE999704.1.gene2815. Protein 2e-35 45
Desru_2551 YP_004546065.1 response regulator receiver AF155139.2.orf0.gene Protein 2e-40 44
Desru_2551 YP_004546065.1 response regulator receiver AE015929.1.gene1106. Protein 3e-27 43
Desru_2551 YP_004546065.1 response regulator receiver FJ349556.1.orf0.gene Protein 1e-39 43
Desru_2551 YP_004546065.1 response regulator receiver NC_012469.1.7686381. Protein 4e-35 43
Desru_2551 YP_004546065.1 response regulator receiver NC_012469.1.7685629. Protein 2e-31 43
Desru_2551 YP_004546065.1 response regulator receiver AM180355.1.gene1830. Protein 9e-38 43
Desru_2551 YP_004546065.1 response regulator receiver NC_003923.1003417.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_013450.8614146.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_002951.3238224.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_007793.3914065.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_002758.1121390.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_010079.5776364.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_002952.2859858.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver NC_007622.3794948.p0 Protein 3e-29 42
Desru_2551 YP_004546065.1 response regulator receiver AE016830.1.gene1681. Protein 3e-33 42
Desru_2551 YP_004546065.1 response regulator receiver NC_005054.2598277.p0 Protein 3e-39 42
Desru_2551 YP_004546065.1 response regulator receiver AF130997.1.orf0.gene Protein 3e-32 42
Desru_2551 YP_004546065.1 response regulator receiver NC_014475.1.orf0.gen Protein 3e-39 42
Desru_2551 YP_004546065.1 response regulator receiver DQ212986.1.gene4.p01 Protein 4e-35 42
Desru_2551 YP_004546065.1 response regulator receiver EU250284.1.orf4.gene Protein 6e-34 41
Desru_2551 YP_004546065.1 response regulator receiver AF162694.1.orf4.gene Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_2551 YP_004546065.1 response regulator receiver VFG1563 Protein 9e-34 41
Desru_2551 YP_004546065.1 response regulator receiver VFG1702 Protein 2e-33 41