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Name : Desru_2499 (Desru_2499) Accession : YP_004546016.1 Strain : Desulfotomaculum ruminis DSM 2154 Genome accession: NC_015589 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 2544706 - 2547342 bp Length : 2637 bp Strand : + Note : TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: drm:Dred_1599 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix d DNA sequence : TTGTCCCTGGATATCCTCTTGGTTATAGACGGAAATAGTTTGATACACCGGGCTTTTCATGCCCTCCCCCTGTTAAGCAA CAGCAAAGGCGTTTTTACCAATGCCGCTTACGGGTTTACCACCATGCTGATGAAAGTACTAAATGAAGAGCAGCCGGGTC TGGTTACCGTGGCCTTTGATAAAGGAAAGAAAACCTTTCGTAATGAACAGTATGCTGATTACAAAGGAACCCGTAAAGCT ACGCCCGATGAGCTTAGACCCCAATTTTTGCTGGTCAAGGATATTCTGAAGGCCATGCGTATTCCTTATTTTGAGTTGGA AGGTTATGAGGCCGACGATTTAATCGGCACCATTACCACCCAGGGAGAATCCATGGGTCTCAATATACGGATTTTGACCG GTGACCGGGACGCCTTGCAACTGGTGTCACCGAAAACCAAAGTTATGCTGACACGCAAGGGAATTACTGAAATCGAACTG TTTGATGAGGGAAAGGTCTGGGACCGGTTCGGCATTCATCCCCATCAGATCATTGATTTAAAAGCCCTGCAGGGAGATAC TTCGGACAATATTCCCGGTGTTCCGGGCATCGGTGAGAAAACTGCCGCTGTTCTGATCAAGGAATATGGTCAAGTGGAGG AGGTTATTCGCAATCTGGATCACCTGTCTCCCAGGCATCAAAAATTGCTCCGGGGCCATGAGGACCAAGCCCTGCTTTCC AAAAGCCTGGCCACCATCGTAAAAGATGTGCCCATGGAAATTGATTTATCCCAATGCTCCTGGCGTGGTCCGGACTATCC GAAGCTTTTGGATGTTTTCAATGATTTGGAGTTTAAAACTCTCATTAAGCAGATTATTGAGGGTTCAAGAAAATCAAAAA AATCCAAAGAAGCCAAAAGCGATCTGCCCCCTGTAAAAACTTACCGGGTAGGCTACCAAACCATTACCGACCCCCGGGAG CTACCGGACATCTTAACCAAGATTAACAAAGCCGGTCAGGTGGCTTTATCTCTTGAAGGTTCCCGCAACCAGGGCGTCAC TGGAATGGCCCTGGCCTTTGACGATTCCGAGGTGCTGTTGCTGCCATCGGAAGCCATGGATGCTTTGGGGCTGGAACTGC TGCAATCCCTGTGTGAAGACCCCCAGATTAAAAAATATTTTCATAACGCCAAAAATGCCATCTGGTTATTGCACCGGCAG GGCATAACCCTTAGAAATTTGGCCGGCGACACCATGGTGGCGGCTTATCTGCTGAATCCCACCGCTGCCAATTATGACCT GACGGATATTGCCCTGGAACACCTGGGCATTGTGTTGCCCGTGGAGGGGACCATGGCCTGGGCGGCCGCAGCCGACGCCA TCCTTCGCCTGGCCCCGGCTCTGCACCAAAAGCTCCAGGCCCGGGAAGAGGACCGCCTTTATGAAGAGGTGGAACTCCCT TTGATTTCCGTTCTGGCCAATATGGAAATAGCAGGCATCACCGTGGATCAGCAGCAATTAAAGGAAATTTCTGCCGAACT GCAGGAAGCCATCGAAGCACTGGCAACACTGATTCACCACCTGGCCGGCGAGGAATTCAACATTAACTCCACCCGGCAGT TGGGACAGATTTTATTTGATAAATTAAAACTGCCTGTTTATAAAAAAACCAAAACAGGCTATTCAACGGATGCGGAGGTC CTTGAAAAACTGGCTGAAGAGCATGAGATTGTTTCCGTTCTGCTGGAGTACCGCCAGTTAACAAAACTAAAATCCACCTA TGCCGACGGTCTGGCGGCATTGGTTGATCCGCAAACCAAAAGGCTGCACTCGACCTTCCACCAGACTGTAACGGCCACCG GCAGACTCTCCAGTGCGGAACCTAACTTGCAAAACATCCCCATCCGTTTGGAGTCCGGCAGGCGCATTCGGAAGGTTTTT GTTCCCCGCCAAAGGGGCAATTTAATTCTGACGGCGGACTACTCTCAAATTGAATTAAGAATTTTAGCTCACGTTTCCCA GGACGCCAGTTTCCTGGACGCCTTCCGGCAGGGCCAGGATATACACACCCGGACGGCGTCCGAAGTTTTCGGCGTGTCCA TGGATGAGGTTACGCCACAGTTGCGCGGCCGGGCCAAGGCGGTAAATTTCGGCATTGTTTATGGCATCAGTGATTTCGGC TTAGCCAGGGACTTGAGAGTGAGCCGGAAGGAAGCCAAGAGTTACATTGACAGTTATTTCGCCCGCTGTCCCGGTATACA AAACTACATCCACCGGGTTATTCAGGAGGCCAAAGAACAGGGTTATGTAACCACCCTGTTAAACCGCCGCCGTTACCTGC CGGAATTGTTTAGCTCCAACTACAATATCCGGAGTTTTGGGGAGCGCGCCGCCATGAACACGCCCATCCAGGGGACTGCC GCGGACATTATTAAAATGGCCATGGTGAGAGTGCACCAGGAATTGCGGGAACAGGATTTAAAGGCTAAAATGGTTTTGCA GGTTCATGATGAATTGATTTTTGATGTCCCGGAGCAGGAAGTGGAAAAGCTTGCGGCTTTGGTTCGGCAATATATGGAAA GTGCTTTGCAAATGGATGTTCCCCTGGTGGTGGATATTAAAATAGGACCCAACTGGTACGATAAGAGACCTCTTTAA Protein sequence : MSLDILLVIDGNSLIHRAFHALPLLSNSKGVFTNAAYGFTTMLMKVLNEEQPGLVTVAFDKGKKTFRNEQYADYKGTRKA TPDELRPQFLLVKDILKAMRIPYFELEGYEADDLIGTITTQGESMGLNIRILTGDRDALQLVSPKTKVMLTRKGITEIEL FDEGKVWDRFGIHPHQIIDLKALQGDTSDNIPGVPGIGEKTAAVLIKEYGQVEEVIRNLDHLSPRHQKLLRGHEDQALLS KSLATIVKDVPMEIDLSQCSWRGPDYPKLLDVFNDLEFKTLIKQIIEGSRKSKKSKEAKSDLPPVKTYRVGYQTITDPRE LPDILTKINKAGQVALSLEGSRNQGVTGMALAFDDSEVLLLPSEAMDALGLELLQSLCEDPQIKKYFHNAKNAIWLLHRQ GITLRNLAGDTMVAAYLLNPTAANYDLTDIALEHLGIVLPVEGTMAWAAAADAILRLAPALHQKLQAREEDRLYEEVELP LISVLANMEIAGITVDQQQLKEISAELQEAIEALATLIHHLAGEEFNINSTRQLGQILFDKLKLPVYKKTKTGYSTDAEV LEKLAEEHEIVSVLLEYRQLTKLKSTYADGLAALVDPQTKRLHSTFHQTVTATGRLSSAEPNLQNIPIRLESGRRIRKVF VPRQRGNLILTADYSQIELRILAHVSQDASFLDAFRQGQDIHTRTASEVFGVSMDEVTPQLRGRAKAVNFGIVYGISDFG LARDLRVSRKEAKSYIDSYFARCPGIQNYIHRVIQEAKEQGYVTTLLNRRRYLPELFSSNYNIRSFGERAAMNTPIQGTA ADIIKMAMVRVHQELREQDLKAKMVLQVHDELIFDVPEQEVEKLAALVRQYMESALQMDVPLVVDIKIGPNWYDKRPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-159 | 43 |
