Gene Information

Name : Desru_2185 (Desru_2185)
Accession : YP_004545720.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 2206086 - 2208704 bp
Length : 2619 bp
Strand : -
Note : KEGG: drm:Dred_1527 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein;

DNA sequence :
GTGCAAGGAATCCATAACCATAATCAAAAAACGCACGGCGGATGTGGCTGCGGCAATTGCTCCCATACCGCAGAAGAAAA
TGCGGAGGTAAAGGATGCGCAGATGGCCCATTCCGGCGAGGGAGTACTGCCTGATAAAAAGCGAAATCCTTTATCCGGTG
TTACATTAGGGAAGATAGATTATAGTACGGCCCTGACCAGAGAGTCCCATAGCATGCCCCAAAAACCGGAGGCCCTTTTG
GAGCAAAGACAGCAGGGGCAAAAGAGCCGGTTCCGCATAAGCGGCCTGGACTGTGCCGATTGCGCCGCTAAATTGGAGAA
AAGAATCAAGGCCCTGCCCGGTGTGACAGAAGCCAGTATTAACTTCGGAGCGGGTAAAATGACCGTCAGCCACACCTCGG
CTCTGTCATCCATCTTGGAGGCCGTGAAGGCCGCCGGCTACCAGGCTCACTTAGAGGGAGGACAAAAAACCACGGTTTTC
CGGATAAGCGGGATGGACTGCGCCGATTGCGCCGCCAAGCTGGAAAAAAAGCTCCAGGTATTAAGCGGTGTGACGGAAGC
AAAAATTAACTTTGGGGCAGGAAAATTGACAGCGAAGCACACAGCCTCGACAGAAACCATTTTGAAGGCCATCGAGAATG
CCGGTTTTCAAGGCCGGTTGGCTAACGAAGAAAGGAAGCCGGTGACGAAAAGTTTCTTCGCAGAGATCAAGATGATTCTA
ACGGTTCTGTCGGGCTTATTGGTTGGGGCAGGCTTTATCCTTTCTTATCTTAACATGCCGGATTTCATGGTAACGGCGGT
TTATCTTGCCGCTATGATCAGCGGAGGGTTTTACACAGCCAGGAGCGGTTTGTATTCCCTCAAGTCATTGTCCTTGGATA
TGAATTTCCTGATGATGGTGGCGGCCATCGGCGCGGCAGCCATCGGGGAATGGGCGGAAGGAGCCACGGTGGTATTCCTG
TTTGCCCTGGGCAATACTCTGCAGGCTTATACCATGGATAAAACCCGCAACTCCATCCGGGCGCTGATGGATCTCTCCCC
CAAAGAGGCTTTGGCACGGCGCAACGGTCAAGAGGTACACCTGCCGGTGGAGGAATTGGTGGTGGGGGACATCATCATTG
TGAAACCCGGTGAGCGCATCCCTATGGACGGTGAAGTGCTGGCAGGACGAACCGATGTAAATCAATCCTCCATCACCGGG
GAGTCCATGCCGGTGGAGAAAACTGTTGGCCATGAGGTTTATGCCGGTACCATCAACGGTCAGGGGTCCATAGAAGTTAA
AGTCACCAAATTGGTAAAAGACACCACTCTGGCTAAAATCATTAATCTGGTGGAAGAGGCCCAGGCCCAGAAGGCGCCGT
CCCAGCAGTTTGTGGATGTGTTTGCCGGATACTACACACCGGCGGTGATTGTCACTGCCGTCCTGGTGGCCTTGCTGCCC
TGGCTTCTTTTCGGACAACCGTTTCAGCCTTGGTTTGAGCGGGCGCTGATTCTGCTGGTGGTTTCCTGCCCCTGCGCCCT
GGTGATTTCCACCCCGGTGTCCATTGTAGCCGCCATTGGCAGCGCCGCCAAAAAAGGCGTGTTAATCAAAGGCGGGGCCT
ATCTGGAAGAGGCCGGAGCTTTAAAAGTAATTGCCTTTGACAAGACCGGTACACTGACCGACGGCAGGCCGGAAGTGAAC
GCCGTCATTCCTGTTGGCAGCTTTGACTCTCAACAGGTAATGGAAATTGCCGCGGCTATTGAAAACCGCTCCCAGCACCC
GCTGGCGGAAGCCATTTTAAGATATGCCCGGCAAGAGAACATCCCGGTGCCGGAAGGCACGGATTTTCAATCCTTCACCG
GCAAGGGCGCCGCATTGCGGTTAAAGGGTGAACAGTACTACATCGGCAACAGCCGGTTATTTGAAGAGATAAAGGTATCC
CTAAACTATCTGCAAGAACAGATTACGGCATTGCAGCAACAGGGTCAGACCGTAATGATTTTGGGCAGCGGCCAAGAGGC
TTTGGGTCTTATTGCGGTGGCGGATAAAATCAGGGAGAGCAGCCGGGCCGCAGTGGCGGGAATGTACCGGGCGGGCATTG
CCAAATTGGTGATGCTAACCGGGGATAATGCCGGAACCGCCCGGGTGATTGCCGGGGAACTGGGCATTGACGATTTTCGA
GCCGAATTGCTTCCTGAGCATAAGCTGACAGCCATTCAACAATTGCAGAAGGAGAGCGGTAAGGTAGCCATGGTTGGAGA
CGGAGTCAATGACGCGCCGGCTTTGGCCACTGCCACTGTGGGCATTGCCATGGGCGGAGCCGGTACGGATACCGCCCTGG
AAACCGCAGACATTGTACTCATGGCGGACGACCTGACCAAATTACCCTATGCCATGCACTTGAGCCGCCGGGCTCTGAGC
ATTATTAAACAAAACATCGGCTTCTCCCTGCTGGTAAAGGCTGTCTTCCTGGTGGCCACTTTCCTGGGAATGGCCAATTT
GTGGATGGCGGTTTTTGCGGATACCGGCACCGCCCTGCTGGTAATTGCCAACGGTATGAGGTTGATGAAGGTGGGAGATC
CCTATACTGAGACGACTGTCCGGCCAAAGCAATCCACTGTAGCCTGCCCCAGCCTATAG

Protein sequence :
MQGIHNHNQKTHGGCGCGNCSHTAEENAEVKDAQMAHSGEGVLPDKKRNPLSGVTLGKIDYSTALTRESHSMPQKPEALL
EQRQQGQKSRFRISGLDCADCAAKLEKRIKALPGVTEASINFGAGKMTVSHTSALSSILEAVKAAGYQAHLEGGQKTTVF
RISGMDCADCAAKLEKKLQVLSGVTEAKINFGAGKLTAKHTASTETILKAIENAGFQGRLANEERKPVTKSFFAEIKMIL
TVLSGLLVGAGFILSYLNMPDFMVTAVYLAAMISGGFYTARSGLYSLKSLSLDMNFLMMVAAIGAAAIGEWAEGATVVFL
FALGNTLQAYTMDKTRNSIRALMDLSPKEALARRNGQEVHLPVEELVVGDIIIVKPGERIPMDGEVLAGRTDVNQSSITG
ESMPVEKTVGHEVYAGTINGQGSIEVKVTKLVKDTTLAKIINLVEEAQAQKAPSQQFVDVFAGYYTPAVIVTAVLVALLP
WLLFGQPFQPWFERALILLVVSCPCALVISTPVSIVAAIGSAAKKGVLIKGGAYLEEAGALKVIAFDKTGTLTDGRPEVN
AVIPVGSFDSQQVMEIAAAIENRSQHPLAEAILRYARQENIPVPEGTDFQSFTGKGAALRLKGEQYYIGNSRLFEEIKVS
LNYLQEQITALQQQGQTVMILGSGQEALGLIAVADKIRESSRAAVAGMYRAGIAKLVMLTGDNAGTARVIAGELGIDDFR
AELLPEHKLTAIQQLQKESGKVAMVGDGVNDAPALATATVGIAMGGAGTDTALETADIVLMADDLTKLPYAMHLSRRALS
IIKQNIGFSLLVKAVFLVATFLGMANLWMAVFADTGTALLVIANGMRLMKVGDPYTETTVRPKQSTVACPSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 4e-167 48
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 4e-167 48
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-163 47
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 3e-134 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_2185 YP_004545720.1 heavy metal translocating P-type ATPase BAC0124 Protein 4e-107 44
Desru_2185 YP_004545720.1 heavy metal translocating P-type ATPase BAC0298 Protein 5e-128 43
Desru_2185 YP_004545720.1 heavy metal translocating P-type ATPase BAC0100 Protein 9e-72 41