Gene Information

Name : Desru_2009 (Desru_2009)
Accession : YP_004545551.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2023682 - 2024389 bp
Length : 708 bp
Strand : +
Note : KEGG: hmo:HM1_2078 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
TTGGCTAAAATACTTGTGGTAGATGATGAGACCAATATCCTGGAGTTAATTAAATTTAACCTGGAAAAGGATGGGCACCA
GGTAATCACAGCAACCAGCGGCGAGGAAGGATTACGTTTAGCCAGACTGGAATTGCCGGATTTGATTATTCTGGACGTCA
TGCTGCCGGAACCGGACGGACTGGAGGTCTGCCGCCGCCTGCGCAGTGATCGGGCCACCACCGCCTTGCCGGTATTAATG
ATCTCCGCCCGGGGGGATACCCTGGACCGGGTGGTGGGTTTGGAAATGGGAGCCGACGATTATATTCCCAAACCCTTTAG
TCCCAGAGAATTATCCGCCCGGGTAAAGGCGGCCCTGCGCCGGATCAAACACGACAAGCCCCCGGTTATCGTCAGCCGGG
AGATAAAATACGGCGGCATTACGGTGGATTTAGAGAAATTCCAAGTTCAGGTAAACGGAGAACTGGTCAGTTTTACGCCC
AAGGAATTTAAGCTCTTAAAGATTCTCATATCTCATCCGGGCAAAGTATTTACCCGGGAGCAGCTTTTGGACCGGGTTTG
GGGCTTTGACTTCAATGTGGATACCCGGACGGTGGACGTTCATGTTCGTTATGTCCGGCAAAAGATCGAGCAGGACCCGG
CCAATCCTCAATACATTAAAACCGTAAGGGGAGTAGGCTACAAGTTTTCCGAAAACACAGCTAAGTAA

Protein sequence : 
MAKILVVDDETNILELIKFNLEKDGHQVITATSGEEGLRLARLELPDLIILDVMLPEPDGLEVCRRLRSDRATTALPVLM
ISARGDTLDRVVGLEMGADDYIPKPFSPRELSARVKAALRRIKHDKPPVIVSREIKYGGITVDLEKFQVQVNGELVSFTP
KEFKLLKILISHPGKVFTREQLLDRVWGFDFNVDTRTVDVHVRYVRQKIEQDPANPQYIKTVRGVGYKFSENTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-40 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-39 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_2009 YP_004545551.1 response regulator receiver NC_003923.1003749.p0 Protein 1e-52 51
Desru_2009 YP_004545551.1 response regulator receiver HE999704.1.gene2815. Protein 2e-53 50
Desru_2009 YP_004545551.1 response regulator receiver NC_012469.1.7685629. Protein 1e-46 50
Desru_2009 YP_004545551.1 response regulator receiver NC_002952.2859905.p0 Protein 2e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_007622.3794472.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_002758.1121668.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_009641.5332272.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_013450.8614421.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_007793.3914279.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_002745.1124361.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_009782.5559369.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_002951.3237708.p0 Protein 1e-52 50
Desru_2009 YP_004545551.1 response regulator receiver NC_012469.1.7686381. Protein 2e-49 49
Desru_2009 YP_004545551.1 response regulator receiver AE016830.1.gene1681. Protein 5e-48 47
Desru_2009 YP_004545551.1 response regulator receiver AE000516.2.gene3505. Protein 1e-37 46
Desru_2009 YP_004545551.1 response regulator receiver BAC0197 Protein 4e-29 45
Desru_2009 YP_004545551.1 response regulator receiver NC_007793.3914065.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_002758.1121390.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_010079.5776364.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_002952.2859858.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_007622.3794948.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_003923.1003417.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_013450.8614146.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver NC_002951.3238224.p0 Protein 5e-37 43
Desru_2009 YP_004545551.1 response regulator receiver HE999704.1.gene1528. Protein 7e-36 43
Desru_2009 YP_004545551.1 response regulator receiver CP000675.2.gene1535. Protein 6e-36 42
Desru_2009 YP_004545551.1 response regulator receiver AF155139.2.orf0.gene Protein 4e-40 42
Desru_2009 YP_004545551.1 response regulator receiver CP000034.1.gene3671. Protein 2e-42 42
Desru_2009 YP_004545551.1 response regulator receiver AE015929.1.gene1106. Protein 3e-33 41
Desru_2009 YP_004545551.1 response regulator receiver CP001485.1.gene721.p Protein 4e-31 41
Desru_2009 YP_004545551.1 response regulator receiver BAC0111 Protein 4e-31 41
Desru_2009 YP_004545551.1 response regulator receiver FJ349556.1.orf0.gene Protein 4e-37 41
Desru_2009 YP_004545551.1 response regulator receiver EU250284.1.orf4.gene Protein 1e-32 41
Desru_2009 YP_004545551.1 response regulator receiver CP000647.1.gene2531. Protein 1e-36 41
Desru_2009 YP_004545551.1 response regulator receiver BAC0083 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_2009 YP_004545551.1 response regulator receiver VFG1389 Protein 1e-29 45
Desru_2009 YP_004545551.1 response regulator receiver VFG1563 Protein 2e-40 43
Desru_2009 YP_004545551.1 response regulator receiver VFG1390 Protein 3e-39 42
Desru_2009 YP_004545551.1 response regulator receiver VFG1702 Protein 2e-39 42
Desru_2009 YP_004545551.1 response regulator receiver VFG1386 Protein 2e-35 42
Desru_2009 YP_004545551.1 response regulator receiver VFG0596 Protein 1e-27 41