Gene Information

Name : Desru_0017 (Desru_0017)
Accession : YP_004543609.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 21399 - 22283 bp
Length : 885 bp
Strand : +
Note : KEGG: drm:Dred_0617 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
TTGACGGATAAAGGAACATGGACCGTTAAAAAAGGCCTGGCAGAGATGCTTAAAGGCGGCGTTATAATGGATGTTACCAC
TCCGGAACAGGCTAAAATTGCTGAAGAGGCCGGAGCCTGTGCCGTTATGGCATTGGAGAGGGTTCCCGCAGATATCCGGG
CTGCCGGCGGTGTGGCTAGAATGGCGGATCCTAACATTATTTTACGCATAATGGAAGCGGTAAGCATCCCGGTTATGGCC
AAGGCCCGGATTGGCCATTTTGTTGAAGCCCAGATATTGGAAGCGCTGGGTGCGGACTATATTGATGAAAGTGAAGTTCT
GACGCCGGCGGATGAGGTATTCCACATTGATAAGCATCAATTTAAAGTACCCTTTGTTTGCGGCTGCCGTAACTTGGGGG
AAGCACTGCGCAGAATTGGCGAAGGAGCGGCCATGATCCGTACCAAAGGAGAACCGGGCACGGGCAATGTAGTGGAGGCT
GTGCGCCATATGCGTCAGGTTATGAGTGAAATCCGTATGGTTCAACATATGCCTAAGGATGAATTAATGACGGCGGCCAA
AGAAATGGCTGCACCCTATGAATTGGTATTGCAGGTTCACGAGCTGGGACGCCTGCCGGTGGTGAATTTTGCTGCCGGGG
GAATTGCCACTCCCGCGGATGCCGCTTTAATGATGCAGTTGGGTTGTGACGGTATTTTCGTTGGCTCCGGTATTTTCAAA
TCCAAAGATCCGGCTGCCAGGGCCAAAGCCATCGTGGCTGCCACCACCCATTATAACGATCCCAAGATTTTGGCGGAAAT
ATCCAAAGACCTGGATGAAGCCATGCCGGGAATTGAAATTGCTACCATCGCCGCTGAACAGCGCATGCAGGATAGAGGAT
GGTAA

Protein sequence : 
MTDKGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPNIILRIMEAVSIPVMA
KARIGHFVEAQILEALGADYIDESEVLTPADEVFHIDKHQFKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVVEA
VRHMRQVMSEIRMVQHMPKDELMTAAKEMAAPYELVLQVHELGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFK
SKDPAARAKAIVAATTHYNDPKILAEISKDLDEAMPGIEIATIAAEQRMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-85 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-85 70
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-85 69