Gene Information

Name : Desru_1865 (Desru_1865)
Accession : YP_004545412.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1883132 - 1884028 bp
Length : 897 bp
Strand : +
Note : PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_1982 tyrosine recombinase XerC

DNA sequence :
ATGTATGTTTTAGTGGATGATTTTATTCATTTTTTAAAAGTACAAAAGAATTTTTCCAATTTAACCGTAGAAGCTTATCA
AAAAGACCTGTTTGAAGGAATTGATTTCTTCGCCAAGGCTTTGAACTGTTCCGACGAATCCCTGGAACCGAAAGAAATCA
ATACCCGTTTGATGCGGGGGTTTTTGTCCCACCTACAGAAAAAAGGACTGAGCCGGGCCACCATTGCCAGAAAGTTGGCT
GCCTGGCGCTCTTTTTTCCGGTTCTTGTTTCGGGAAAACCGGGTTAAGGGCAATCCCATGGTCCGGATGACCAATCCCAA
GCAGGAGAAAAGACTGCCCCAATTCCTTTATCAGGAAGAGGCCCGGGTATTGATTGAATCACCGGACAGCTCGCTCCTGG
GAATCCGGGACAGGGCCCTGCTGGAACTGCTTTATGCCACAGGAATCCGGGTTTCTGAGCTGGTATCAATGGATTTGGCC
CAATTGGACCTCCACCGGGGTTATGTCCTGGTCAGCGGCAAAGGATCCAAGGAAAGAATGGTGCCTCTTCATGACCGGGC
CGTTCAAGCCATAGAAAAATATTTGCATACCAGCCGACCGAAATTGGCTGCCATGAATTGTTCAGCGGTTTTTGTGAATT
ATAAAGGAAACAGAATCAGTGACCGGGCTGTTCGTAAAATACTGGTAAAATACTGTCGGCAGGTTCATTTTAAAAAAGAG
ATCGGTCCCCATGTCATCCGCCATTCCTTTGCTACCCACCTGCTGGATAACGGGGCGGATTTACGAAGTGTGCAGGAACT
ATTGGGGCATGTATCCCTGTCAACAACCCAGATTTACACCCATGTTACCAGGCAGAAGCTTAAGAAAATATACCGCTTGG
CTCATCCCAGGGCCTGA

Protein sequence :
MYVLVDDFIHFLKVQKNFSNLTVEAYQKDLFEGIDFFAKALNCSDESLEPKEINTRLMRGFLSHLQKKGLSRATIARKLA
AWRSFFRFLFRENRVKGNPMVRMTNPKQEKRLPQFLYQEEARVLIESPDSSLLGIRDRALLELLYATGIRVSELVSMDLA
QLDLHRGYVLVSGKGSKERMVPLHDRAVQAIEKYLHTSRPKLAAMNCSAVFVNYKGNRISDRAVRKILVKYCRQVHFKKE
IGPHVIRHSFATHLLDNGADLRSVQELLGHVSLSTTQIYTHVTRQKLKKIYRLAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-41 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-41 43