Gene Information

Name : Desru_1711 (Desru_1711)
Accession : YP_004545261.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1737838 - 1739892 bp
Length : 2055 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: drm:Dred_2088 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma

DNA sequence :
TTGCTGTTACAAAAACCGGTGCAGTTTCTCAAAGGAGTGGGACCCCAGCGGGCCAGACAGTTGGAGCGGATCGGTATTTT
AAGCGTTGGGGATTTACTTTATCATTTTCCCCGGGAATACCAGGACCGGAGCAGCATTCGACCGGCCCACTCCTTTGCTC
ACGGGGATTTGGCCACCGTCCGGGGAACCGTCATTACCGGCCAGGAGACAAAACCCAGACGGGGGCTGACCCTCACAAAA
CTGGCTTTGGAAGAAGAGGCGGGAATTTTTTACGCCGTTTGGTTTAACCAACCCTATATCAAAAAGCAGTACCCTCCGGG
GAAAAGATTGCTGCTTACCGGTAAAATGGACCGCAGTTTTGGGGTACCCCAGATCCAGGTGGCGGATCATGAAGTGCTGG
AGGGTGATGAAAGCCTGCATAGCGGAAGAATTGTCCCCATTTATCCGGCTACCGAGAATATTAGCCAGCGTTTTTTTCGG
AGCATGATTAAAGGATTTTTGGACGGAGTCGGAGCGAATCTGCCGGAGTTTTTACCGGATGAAATTCTGGACCGGTATCA
TCTGCCTTGTGTTGCCGAAGCGCTGGCGGAAATCCATTTCCCCACCAGCATGGAAGCCTGCCAGCGGGCCAGAAAGCGTT
TTGTCCTGGAAGAGTTGTTTCTTTTTCAATTGGGGCTTTGCCTGCAGAAGGACCGCACCAACCGGCAGGAAAAAAGCCAC
CGCTATAAAAGTCGTAAGGTTGTAAAATCTTTTGCTGACATCCTGCCTTTCCAATTAACAGAGGCCCAAAAACGGGTCTG
GCAGGAAATTGAGAGGGACATGGAGGCTTCCCGGCCCATGAACCGGCTGCTTCAGGGAGATGTGGGGTCCGGCAAAACCG
CTGTGGCGGCTTTGGCCCTGTACAAAGCGGCAGCATCCGGACTGCAGAGTGTCCTTATGGTCCCCACGGAACTGCTGGCA
GAGCAGCACGCCGCCAGCGTCGGCAAACTGTTGGAGCCCTTGGGCATCCGGGTGGCGCTGCTGACCGGAGGCAGCCGCCG
GGGCCGCAAACAAGTGCTGGAGCAGATTGCCGGAGGAGAAATTGACGTGGTGGTGGGCACCCATGCCCTGATCCAGGGGC
CGGTGCAGTTTAAGCAACTGGCTCTGGTGGTTGTGGACGAGCAGCACCGTTTCGGGGTACGCCAGCGGGCGGCCCTGCAG
GATAAAGGACACAGGCCGGATATTTTGGTGATGACCGCCACGCCCATCCCGCGAACCCTGGCCTTAACCCTTTACGGTGA
GCTGGAGGCATCTGTCATTGACGAGCTGCCTCCGGGCAGACAGCCTGTTAAAACCTATCATTTGAGCTTGTCCCAGGCGG
GGAAAGCGGTGGGGTTAATCCGGCAGCAGGCTGTGGAGGGCCGGCAGTCCTATGTAGTATGTCCGCTGGTGGAAGAATCG
GAAAAGATTGATACTCAGGCGGCCATTGAACTGCATGAACGGTTGAAGCGGGCCTTAAGCACCTGTTCAGTGGGCCTGCT
GCACGGTAAAATGAAGCCCGCTGAGAAAGAAGCCGTAATGGGAGAGTTTCGCAGCGGTTCGCTGGATATTCTGGTATCCA
CCACGGTGATTGAAGTGGGGGTGGATGTCCCCAATGCCACCGTGATGGTCATCTGGGATGCCCAGCGGTTTGGTTTGTCC
CAACTGCATCAGCTCCGGGGCCGGGTGGGCAGGGGGAAGCATTTATCTTACTGTATTCTGGTGGCGGATCCGTCCACCAG
GGAAGCCAGGGAACGGATGGCAGCCATGTGCCGGACGCAAAACGGTTTTATTCTGGCTGAAGAGGATCTTAAACTGAGGG
GACCGGGAGAGTTTTTTGGCACCCGGCAGTCGGGCCTGCCGGATTTTAAGATTGCCAGTTTAATCAAGGATCAGCGGGAG
ATTGAGCAGGCCCGGGCAGAAGCCCGGCAACTGTTAAAAGACGATCCGGATTTGCGTCTGCCTCAGCATCGGGAACTGTT
AAACCAGTTTGCTTTACGGTTTCCCGAATTTGTAAAATACAGTGAAATTAGTTAA

Protein sequence :
MLLQKPVQFLKGVGPQRARQLERIGILSVGDLLYHFPREYQDRSSIRPAHSFAHGDLATVRGTVITGQETKPRRGLTLTK
LALEEEAGIFYAVWFNQPYIKKQYPPGKRLLLTGKMDRSFGVPQIQVADHEVLEGDESLHSGRIVPIYPATENISQRFFR
SMIKGFLDGVGANLPEFLPDEILDRYHLPCVAEALAEIHFPTSMEACQRARKRFVLEELFLFQLGLCLQKDRTNRQEKSH
RYKSRKVVKSFADILPFQLTEAQKRVWQEIERDMEASRPMNRLLQGDVGSGKTAVAALALYKAAASGLQSVLMVPTELLA
EQHAASVGKLLEPLGIRVALLTGGSRRGRKQVLEQIAGGEIDVVVGTHALIQGPVQFKQLALVVVDEQHRFGVRQRAALQ
DKGHRPDILVMTATPIPRTLALTLYGELEASVIDELPPGRQPVKTYHLSLSQAGKAVGLIRQQAVEGRQSYVVCPLVEES
EKIDTQAAIELHERLKRALSTCSVGLLHGKMKPAEKEAVMGEFRSGSLDILVSTTVIEVGVDVPNATVMVIWDAQRFGLS
QLHQLRGRVGRGKHLSYCILVADPSTREARERMAAMCRTQNGFILAEEDLKLRGPGEFFGTRQSGLPDFKIASLIKDQRE
IEQARAEARQLLKDDPDLRLPQHRELLNQFALRFPEFVKYSEIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-88 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_1711 YP_004545261.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-98 43