Gene Information

Name : Desru_1706 (Desru_1706)
Accession : YP_004545256.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 1733712 - 1734845 bp
Length : 1134 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: drm:Dred_2093 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
TTGGAAGCGGGTACTGACAGTCATTATATGCAAATGGCCCTGGAACTGGCTGCCAGAGCCAGGGGGCGCACCAGCCCCAA
TCCCCTGGTGGGGGCGGTTATTGTCAAGGAAGGGCAGGTTATTGGGAAAGGGTTTCATGCCAAAGCAGGGGGCGCCCATG
CCGAAGTGGTTGCTCTGATGGAGGCCGGCGAACAGGCCCGGGATGCCACCCTATACGTCACCCTGGAGCCTTGCTGCCAT
TACGGGCGGACCGGTCCCTGCACGGAAGCGGTAATCAAGGCAGGCATTAAACGGGTGGTGGCGGCCATGACCGACCCCAA
TCCCTTGGTTGCCGGGAAGGGCCTGGAAGTTTTAAAAAAGGCCGGTGTGGAAGTAAAGGCCGGTGTCCTGGAACAGGAGG
CAATGCACTTAAATGAGGCGTTTATCAAATATATTACCACTAAACGCCCCTTTGTAATTTTAAAGTCGGCCACCAGCCTG
GACGGTAAAATTGCCACTGCCGGTGGTGAATCCCAGTGGATTACCGGAAAGGCGGCCCGGGAACAGGGGCATTGGCTGCG
GGACAGGGTGGATGCCATCCTGGTAGGCGTCAATACCATTCTTGCCGATGACCCTTCTCTGACGACGCGGCTGCCTGAAG
GAAGGGGAAAGGACCCCGTCCGCATTGTGGTAGACAGTTTGGCCCGGACTCCCACCGCAGCCAAGGTATTGCTGCAGGAA
TCCGCAGCCCATACCATGATTGCCACCACCGAAGCGGCTCCCGTTGAACGAAGGGCCAGTTTAATGGCGGCCGGGGCAGA
AGTACTGGTTGTCCCGGGTCCGGGCCCCCGGGTGGATCTGGTGAAATTAATGGAATTACTGGGGGAAAAGCAAATAACCC
AGATTTTAATTGAAGGGGGCGGGAAGTTAAACGGTTCCGCCCTGGCGGCAGGCATCGTAGACAAAGTGGTCTGGTTTATC
GCCCCTAAGATTATTGGCGGGGATAGTGCTCCGGGAGCCATAAGGGGGGACGGGGTTCAGGCTCTTAAAGACGCAACCCA
ATTATACGATGTTTCTGTTCAGTGCCTGGAGGGAGACTTTGCTTTTACCGGATATACCTCAAAAAGGGGTGAGAGAATAT
CTTTACTGGAATAA

Protein sequence :
MEAGTDSHYMQMALELAARARGRTSPNPLVGAVIVKEGQVIGKGFHAKAGGAHAEVVALMEAGEQARDATLYVTLEPCCH
YGRTGPCTEAVIKAGIKRVVAAMTDPNPLVAGKGLEVLKKAGVEVKAGVLEQEAMHLNEAFIKYITTKRPFVILKSATSL
DGKIATAGGESQWITGKAAREQGHWLRDRVDAILVGVNTILADDPSLTTRLPEGRGKDPVRIVVDSLARTPTAAKVLLQE
SAAHTMIATTEAAPVERRASLMAAGAEVLVVPGPGPRVDLVKLMELLGEKQITQILIEGGGKLNGSALAAGIVDKVVWFI
APKIIGGDSAPGAIRGDGVQALKDATQLYDVSVQCLEGDFAFTGYTSKRGERISLLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-46 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-46 45