Gene Information

Name : Desru_0144 (Desru_0144)
Accession : YP_004543730.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 143736 - 144488 bp
Length : 753 bp
Strand : +
Note : KEGG: dhd:Dhaf_0031 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGATTTCAAATCACAAAACTACGCAGTGGAGGTGGAAGACCTCACCGTTGCCTATAATGCGAAACCAGTTTTATGGGA
TATTGACTTGAAAATTCCCAAAGGAAAGCTGATGGCGGTGATCGGACCAAACGGAGCGGGCAAGACAACGTTGATTAAGG
CGATGCTGGGGCTGTTAACGCCTGTTTCTGGAGCGGTACGCTTTATAAACGGTGAAGACGTACGCTCGCTGAAAAACCAC
ATTGGCTACGTTCCGCAAAGCGGCAGTGTGGACTGGGACTTTCCCGCAACGGTACTTGACGTGGTGCTGATGGGAACCTA
CGGCAAGCTCGGGTGGATCAGGCGTACCCGCAAGGCGGATATGGAGCTGGCCCGGCAGACATTGAAAAAGGTCGGCATGG
AGGAATATGCCTCACGACAGATCAGTCAGCTTTCCGGAGGCCAGCAGCAGCGGGTGTTTCTCGCCCGGACTCTGGCACAG
GCAGCGGAGATTTACTTCATGGATGAACCGTTTAAGGGGGTGGACGCACAGACGGAAAAAGCCATCGTTCTGCTCTTAAA
AGAGCTGAAAGAGCAAGGAAAGACTGTTGTGGTAGTGCACCATGACCTTCAGACGGTGGAGGATTATTTTGACTGGGTCA
CACTGATTAACATAAGGGTAGTCGCCAGTGGGACGGTCAACGAAGTTTTTCACGAGGAAAATCTGAAAAAAACATATCGG
AGTACCGGTACGCTTCTAAGGAGCGTGGTGTGA

Protein sequence : 
MDFKSQNYAVEVEDLTVAYNAKPVLWDIDLKIPKGKLMAVIGPNGAGKTTLIKAMLGLLTPVSGAVRFINGEDVRSLKNH
IGYVPQSGSVDWDFPATVLDVVLMGTYGKLGWIRRTRKADMELARQTLKKVGMEEYASRQISQLSGGQQQRVFLARTLAQ
AAEIYFMDEPFKGVDAQTEKAIVLLLKELKEQGKTVVVVHHDLQTVEDYFDWVTLINIRVVASGTVNEVFHEENLKKTYR
STGTLLRSVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-48 49
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-48 49
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-48 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-48 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-49 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-49 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0144 YP_004543730.1 ABC transporter-like protein BAC0400 Protein 2e-70 58
Desru_0144 YP_004543730.1 ABC transporter-like protein BAC0350 Protein 2e-49 42
Desru_0144 YP_004543730.1 ABC transporter-like protein BAC0440 Protein 3e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_0144 YP_004543730.1 ABC transporter-like protein VFG0526 Protein 2e-49 42