Gene Information

Name : Desru_1475 (Desru_1475)
Accession : YP_004545027.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1504306 - 1504983 bp
Length : 678 bp
Strand : +
Note : KEGG: shi:Shel_13160 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGGATATTAATTGTGGAGGACGAGATCCGTCTGGCGGAAGCCCTGGGTCAGATCATGAGCGAACATAAGTACGCGGT
GGACATGGTCCATGATGGCGCGGATGGTCTGGATTATGCCCTGAGCGGTCTTTATGATGTGATTGTGCTGGACGTGATGC
TGCCGAAGCGAAGCGGTTTTGAAGTGGTGCGGGAACTGCGCGCCAAAAAGGTTGCCACTCCCGTGCTTCTCCTCACAGCC
AGGGATGAAATTACGGATAAGGTAATCGGATTGGACTGCGGTGCTGATGACTACATGACCAAGCCCTTTTCTCCCGAGGA
ACTTCTGGCTCGCATCCGGGCTCTGGCCAGGAGGCAGGGAGAAGTGGTGCTGGAGGAGTTATCCTTTGCCGATCTGACGC
TTAATTTGTCCACCCGTTGCCTTTGCTCCGGGTCAAAATCGGTGCACTTGGGATTTAAAGAGTTTGAGGTGTTAAAAATT
TTAATGTCCAATCCCAAAATTGTGGTACCTAAAGAAGACTTGATCACCAAGGTCTGGGGGATGGAATCCAACGCGGAAGA
TAACAATGTTGAGGCTTATATCTCTTTCCTGCGCAAAAAGTTCTTTTTTCTTGGCTCCAAGGCCGGTATTGGCACGGTTC
GTAAAGTGGGTTACCGGTTAGAGGCGGAAGAAATATGA

Protein sequence : 
MRILIVEDEIRLAEALGQIMSEHKYAVDMVHDGADGLDYALSGLYDVIVLDVMLPKRSGFEVVRELRAKKVATPVLLLTA
RDEITDKVIGLDCGADDYMTKPFSPEELLARIRALARRQGEVVLEELSFADLTLNLSTRCLCSGSKSVHLGFKEFEVLKI
LMSNPKIVVPKEDLITKVWGMESNAEDNNVEAYISFLRKKFFFLGSKAGIGTVRKVGYRLEAEEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_1475 YP_004545027.1 response regulator receiver BAC0197 Protein 2e-26 43
Desru_1475 YP_004545027.1 response regulator receiver BAC0125 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_002951.3238224.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_007793.3914065.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_002758.1121390.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_010079.5776364.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_002952.2859858.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_007622.3794948.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_003923.1003417.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver NC_013450.8614146.p0 Protein 2e-28 42
Desru_1475 YP_004545027.1 response regulator receiver AE015929.1.gene1106. Protein 1e-25 42
Desru_1475 YP_004545027.1 response regulator receiver BAC0083 Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desru_1475 YP_004545027.1 response regulator receiver VFG0596 Protein 1e-28 41
Desru_1475 YP_004545027.1 response regulator receiver VFG1390 Protein 5e-34 41