Gene Information

Name : Desru_1250 (Desru_1250)
Accession : YP_004544810.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1277269 - 1278054 bp
Length : 786 bp
Strand : +
Note : KEGG: drm:Dred_2396 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
GTGGGTGTCCGGAAAGTGACCAGAAAAGGGAAAAATAATTTATTCATTGTGGTTCTAGCCATTTTTTTGGTATTCTTATC
AGCGAATGCTGCACTGGCAGAGCCGTTGATTCCGATACCCAATATTAATTTAAACGTTGAGACCGCCGATCAGCCCCAGC
AGGTTGTGGACAGTGTCAAGCTGCTGATCTTTTTAACTTTGCTGTCACTGCTGCCGGCTTTCCTGATGATGCTGACTTCC
TTTACCCGCATTGTGGTGGTGTTGTCCTTTTTGCGCAGCGCCCTTGGCACCCAGCAAACACCGCCCAATCAGGTGCTTAT
CGGGCTGGCGTTGTTTTTAACCATTTTTATTATGAATCCTGTCTACCGGGACATTAACCAAAATGCGGTTCAGCCTTATT
TAGCCAATCAATTGACTTATGAACAGGCCGTGGACCAGGCGGCTCAACCTCTAAGGGACTTTATGGTGAGACAAACCAGA
GAGAAGGACCTGGGATTGTTCCTCAGCGTGGCCAAGATGGAAAAGCCCCAGAATATTAATGCCGTTCCCATGTCCGTGAT
TGTTCCTGCCTTTATCATCAGTGAATTGAAAACGGCCTTTCAAATCGGTTTTATTTTATTTGTTCCTTTTCTGGTTATCG
ATATGGTGGTGGCCAGCACCCTGATGTCCATGGGGATGTTTATGCTGCCCCCGGTGATGGTTTCCCTGCCCTTTAAGCTG
CTGTTGTTCGTCATGGTGGATGGCTGGTATCTGGTAGTAAAATCCCTGGTGGAAAGTTTCCGGTAG

Protein sequence :
MGVRKVTRKGKNNLFIVVLAIFLVFLSANAALAEPLIPIPNINLNVETADQPQQVVDSVKLLIFLTLLSLLPAFLMMLTS
FTRIVVVLSFLRSALGTQQTPPNQVLIGLALFLTIFIMNPVYRDINQNAVQPYLANQLTYEQAVDQAAQPLRDFMVRQTR
EKDLGLFLSVAKMEKPQNINAVPMSVIVPAFIISELKTAFQIGFILFVPFLVIDMVVASTLMSMGMFMLPPVMVSLPFKL
LLFVMVDGWYLVVKSLVESFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-31 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 7e-34 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 9e-34 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 9e-34 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 9e-34 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 7e-34 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 9e-34 41