Gene Information

Name : Desru_0118 (Desru_0118)
Accession : YP_004543705.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 121115 - 121924 bp
Length : 810 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB

DNA sequence :
ATGGCATTACTCAAGTTTGCCAGCCTGCCCCGGAGTACCTTCTACTACTATCTAAAAGCTATGGACAGGCCTGATAAATA
CGAAGAAATCAAAGCTGTAATCCAAGAAATATACCACGCTCATAAAGGCAGATACGGCTACCGGAGAATCACCCTTGAAC
TGCATAATAGAGGGTACCGTATTAACCATAAGACGGTCTTAAAGCTGATGGGGCAATGCAACATCAAGTGCCAGGTGCGA
ATACGCAAGTATCGCGCCTATAAAAAAAAGTTGGGTAAAGTAGCCCCCAATATTCTGCAACGTGATTTCAAGGCAGATAA
ACCGAATCAGAAATGGGTTACTGACATTACTGAGTTCTCCCTATTTGGAACAAAGCTGTACCTCTCTCCGATCCTTGATT
TATTTAACGGAGAAATCATCAGCTACAACATATCAGACAGGCCGACCTTCCATCAGATAATAGATATGCTGGATAAGGCA
TTCTCAAAGATTCCTGACAACACAAACCTTATCTTCCATTCAGATCAGGGCTGGCAGTACCAGATGAGAAACTATCAAAA
TAGGCTTAACAAAAAAGGAATTATCCAGAGCATGTCACGCAAGGGTAACTGCTTAGATAATTCAGTAATGGAGAACTTTT
TTGGTCTTTTAAAATCAGAATTACTCTATCTTCAAGACTTCGATTCAGTAGAACATTTCCGAAAGGAGCTCGAAGATTAC
ATAGATTACTATAATAATCAAAGGATTAAGTGCAAACTGAAAGGACTGAGTCCTGTTCAATACAGGATCCAGTCCTCCAG
AGTTGCTTAA

Protein sequence :
MALLKFASLPRSTFYYYLKAMDRPDKYEEIKAVIQEIYHAHKGRYGYRRITLELHNRGYRINHKTVLKLMGQCNIKCQVR
IRKYRAYKKKLGKVAPNILQRDFKADKPNQKWVTDITEFSLFGTKLYLSPILDLFNGEIISYNISDRPTFHQIIDMLDKA
FSKIPDNTNLIFHSDQGWQYQMRNYQNRLNKKGIIQSMSRKGNCLDNSVMENFFGLLKSELLYLQDFDSVEHFRKELEDY
IDYYNNQRIKCKLKGLSPVQYRIQSSRVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-77 59
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 4e-79 56
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 7e-59 51
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 6e-59 51
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-48 42
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-49 42
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 2e-21 41