Gene Information

Name : Desru_1084 (Desru_1084)
Accession : YP_004544645.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : DEAD/DEAH box helicase
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 1118366 - 1119820 bp
Length : 1455 bp
Strand : +
Note : SMART: DEAD-like helicase; KEGG: ccb:Clocel_0764 SNF2-related protein

DNA sequence :
ATGCAGTACGTACCGTATCCCTATCAGGAATTTGCCACCCAGTACATTCTCGAAAAGCCTGGCGTAGGGCTGTTTTTCGA
TATGGGTATGCGGAAAACCGTTTGCACTCTTACAGCCGTTGAGGAACTTTTGTATGACCGGTTTGAGGTTTCCCGGGTAC
TGGTGATCGGCCCTCTCCGGGTGGCGCAAGATGTTTGGATCCGCGAAGTGCGAAAATGGGATCACCTGCAGCAGCTTCGG
GTTTCCAGAGTTTTAGGTTCACGGAAAGAACGTATCGCCGCTTTAAAAGCTCCCGCCGACATCTGGGTAATTAATCGCGA
GAACGTGGAATGGCTGGTGAACTACTACGGCAAGGCCTGGCCCTTCGACATGGTGGTGATTGACGAACTTTCCAGTTTTC
GGAATCCTTCAGCCCGACGATTTAAAGCCCTTCGGAAGATTCGACCATTGGTGAAACGTTGGGTCGGTCTTACCGGTACG
CCAAGGCCGAAGAGTTTGTTGGATCTCTGGGCCCAGGTCTATCTGCTGGACGGTGGAGAGCGTTTGGGGAAAACCTATAC
CGGGTATCGAGAACGGTATTTCGAACCGGATCAACGGAACCGGACCACTATTTTCAGTTGGAAACCGAAGACTGGGGCCG
AAGAAGCCATATACAAGATGATATCGGGTATTTGCATCAGTATGCCGGCTACCGGTTTACCGCCCATAGAACCCCGGATT
GTAAAGATCCCCTTGCCGCCAGAGGCACGGCAGCGATACAACCAGTTAGAAAGAGACATGCTGCTTCCCTACGTGGACGG
AGATGTGGTGGCCTTTACAGCTGCATCGCTGGGGACGAAGCTTCTTCAGATGGCGAACGGTGCTGTGTATGACGAGCATA
AACAGGTTCGGGAGATCCACGACGCTAAATTAAAAGCCTTGGAAGAGGTTTTGGAGGAATTCGGGGAGTGGCCTGTGATG
GTGTTTTACGCCTACCAGCATGACCGGGACCGTATCTTACGGCACTTTCAGGGGAAGCGCATCCGGACTTTAGACGACTC
AAAGGATATTGACGACTGGAACACCGGGAAAATCTCTATTCTGCTGGCCCATCCCGCTTCTACGGGTCACGGGCTGAATC
TCCAGGAAGGTGGTCATGTAATCATCTGGTTTGGCTTGACGCAGGACTTGGAGCTGTACCAGCAGGGGAATGGACGATTG
CGGCGACCGGGGCAGGAACACGATTGTGTCATTGTCGTTCACTTGGTGGTAGAAGGGACGCACGATGAGGATGTACTGCC
TATCCTGGGCGGGAAAGCAAAAGGCCAGGACGCCCTTCTTACGGCAGTGAAAGCCCGAATTGAGAGGGTACAAAAAGGAG
GACCACCTTTGTGCGGCAGCATGGAACCTGCTGGGCGCGATGTGGACAGAGGAAAAAGGGGGTGGAGACAATCGGCAAAA
AACAAAGCACGGTGA

Protein sequence :
MQYVPYPYQEFATQYILEKPGVGLFFDMGMRKTVCTLTAVEELLYDRFEVSRVLVIGPLRVAQDVWIREVRKWDHLQQLR
VSRVLGSRKERIAALKAPADIWVINRENVEWLVNYYGKAWPFDMVVIDELSSFRNPSARRFKALRKIRPLVKRWVGLTGT
PRPKSLLDLWAQVYLLDGGERLGKTYTGYRERYFEPDQRNRTTIFSWKPKTGAEEAIYKMISGICISMPATGLPPIEPRI
VKIPLPPEARQRYNQLERDMLLPYVDGDVVAFTAASLGTKLLQMANGAVYDEHKQVREIHDAKLKALEEVLEEFGEWPVM
VFYAYQHDRDRILRHFQGKRIRTLDDSKDIDDWNTGKISILLAHPASTGHGLNLQEGGHVIIWFGLTQDLELYQQGNGRL
RRPGQEHDCVIVVHLVVEGTHDEDVLPILGGKAKGQDALLTAVKARIERVQKGGPPLCGSMEPAGRDVDRGKRGWRQSAK
NKAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 5e-93 51
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 3e-98 51
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 1e-103 51
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 4e-104 50
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 5e-104 50