Gene Information

Name : Desru_1077 (Desru_1077)
Accession : YP_004544638.1
Strain : Desulfotomaculum ruminis DSM 2154
Genome accession: NC_015589
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 1110434 - 1112398 bp
Length : 1965 bp
Strand : +
Note : KEGG: drm:Dred_1191 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase

DNA sequence :
ATGACAATCCTTAGTATTGATATTGAAACGTACAGCAGTGTAGACCTCGCGAAAAGCGGGGTCTACCGATATACGGAAGC
CCCGGACTTTGAAATTCTGCTGTTTGGATACGCCTTTAATGAAGAACTGGTCCGGGTAATTGACCTGGCCAGTGGGGAGA
CCTTGCCGGAATCGGTACTGGCCGCCTTAACGGATCCTGAAATCGTCAAAACCGCTTTCAATGCTAATTTTGAAAGAACC
TGCATCGCCAAACATTTTGGGCAACCAATGCCGCCGGAACAGTGGCGGTGTACGCAGGTCCATGCGTTGACTCTGGGTCT
TCCTATCCGCCTGGACGGTGTGGCCAAAGCCATGAAACTGGAACAACAGAAAGACAGTGCGGGAAAGGCGTTAATCCGCT
ATTTCTCCATTCCCTGCAAGCCGACCAAGACTAACGGGCAGCGAACCCGCAACCGGCCGGAGCACGCTCCGGAGAAATGG
GCTCAGTTCAAAGCCTATTGTCGGCAGGACGTGGAAGTGGAACGCACCATCCGGAAGGCTTTAGAACGGTACCCAATACC
GGAGATCGAACAGAAACTCTGGATTTTGGATCAGAAAATTAATGACCGGGGGGTCCGGGTGGACCCTGAACTGGTGGCCC
ACGCCATTACTTGTGATACGGCCTACCAGAAGAAACTAGAAGCGGAGGCTGTTCGACTGACCGGTCTTGAGAATCCCAAA
AGTGTTGCCCAACTGAAATCCTGGCTGATGGAAGCAGAGGGACTGGAGATAGAGAGTCTATCCAAAGAAACGGTTCCAAC
GTTGTTGAAACAGACAGAAAGCGAGACCGTTAAACGAGTGCTGGAACTGAGGCAGGAGCTTGCTAAAACCTCCATTAAGA
AATACCAGGCCATGGACCGGGCTCGATGCCAAGACAACCGGATCCGGGGACTCCTGCAGTTTTATGCGGCAAATCGAACC
GGGCGCTGGGCCGGGCGGTTGGTGCAGGTCCAAAATCTCCCGCAAAATAAATTAAAAGACCTGGACCTGGCCCGGCAACT
GCTGCTTTCCGGAGAGTACGACACACTGGAACTGCTTTTTGAAAGTGTTCCCGGAGTATTATCTCAACTTATTAGAACGG
CGTTTATTCCCTCTGCCGGCTGCAGGTTCATCGTGGCCGACTTCTCAGCCATCGAGGCCCGGGTCATTGCGTGGCTGGCA
GGGGAAAAGTGGCGCATGGATGTGTTCAGCTCCCACGGAAAAATCTATGAAGCCTCCGCAAGCCAAATGTTTAAAATACC
GGTGGAATCCATCACCAAAGGAAACCCCCTGAGGCAAAAAGGAAAGATTGCTGAGTTGGCTCTGGGTTACCAGGGCAGCG
TAGGAGCTTTAGTCCAAATGGGCGCCTTGAAAATGGGCCTAAAGGAAGAAGAATTGCCGGAATTGGTGTCCTCCTGGCGG
CAGGCAAACCCAAACATTGTGCAATTTTGGCGGGATGTCGAGAAGACAGCAATTACAGCCGTACAGGAGAAACGGGCAGT
TACACTGCGTCACGGAATTGTTTTCTCCTATGAATCCGGAGCCCTGTTTATCCGTCTCCCTTCCGGGCGCCGCCTGGCTT
ATGTACGACCCAAAATAGGGGTGAACGAACGCTTTAACAAGCCCGCACTTACCTACGAAGGAGTGGAGCAAGGAACGAAA
CAATGGGGACGGCTCTACACCTACGGCGGGAAGCTGGTGGAGAACATTGTCCAGGCTACGGCCCGGGACTGCCTGGCCGA
AAGCCTGTTAAGGCTTCATCAAGTTGGGTATCAAACGGTAATGCATGTCCACGATGAAGCCGTATTGGATGTACCGGACG
ACAAAGACATGGAAGAAGCACAAGAGTATATCTGCTATGTGATGGGCGAACCCATCCCCTGGGCTCCGGGGCTGCCCCTT
CGGGCAGACGTGTTTGAGACAGGTTATTACAAAAAGGACGATTGA

Protein sequence :
MTILSIDIETYSSVDLAKSGVYRYTEAPDFEILLFGYAFNEELVRVIDLASGETLPESVLAALTDPEIVKTAFNANFERT
CIAKHFGQPMPPEQWRCTQVHALTLGLPIRLDGVAKAMKLEQQKDSAGKALIRYFSIPCKPTKTNGQRTRNRPEHAPEKW
AQFKAYCRQDVEVERTIRKALERYPIPEIEQKLWILDQKINDRGVRVDPELVAHAITCDTAYQKKLEAEAVRLTGLENPK
SVAQLKSWLMEAEGLEIESLSKETVPTLLKQTESETVKRVLELRQELAKTSIKKYQAMDRARCQDNRIRGLLQFYAANRT
GRWAGRLVQVQNLPQNKLKDLDLARQLLLSGEYDTLELLFESVPGVLSQLIRTAFIPSAGCRFIVADFSAIEARVIAWLA
GEKWRMDVFSSHGKIYEASASQMFKIPVESITKGNPLRQKGKIAELALGYQGSVGALVQMGALKMGLKEEELPELVSSWR
QANPNIVQFWRDVEKTAITAVQEKRAVTLRHGIVFSYESGALFIRLPSGRRLAYVRPKIGVNERFNKPALTYEGVEQGTK
QWGRLYTYGGKLVENIVQATARDCLAESLLRLHQVGYQTVMHVHDEAVLDVPDDKDMEEAQEYICYVMGEPIPWAPGLPL
RADVFETGYYKKDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 2e-154 54
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 3e-159 51
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 1e-159 51