Gene Information

Name : Isova_0922 (Isova_0922)
Accession : YP_004541600.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : monosaccharide-transporting ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.17
Position : 1005188 - 1006999 bp
Length : 1812 bp
Strand : +
Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: ske:Sked_26180 ABC transporter ATPase; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACGACCCTCGACATCACCAGCAGCGAGACGGCGCGGTCGACCGGCGACGCCGTCCTGTCCTTCGAGGACCTCGGGGT
CACGTTCCGCACCGAGTTCGGCGACGTGCACGCGGTCAAGGGCATCTCCCTCGAGGTGCGCCCCGGCGAGGTCGTGGCCC
TCGTGGGCGAGTCCGGCTCGGGCAAGTCCGTCACGTCGATGACGGCGCTCGGCCTGCTCCCGTCCAACGCCCGCGTCTCC
GGCGTCGTGCGCGTCGGCGACCAGGTCGTCGGCGAGCTCGACGGCGCGGGTCTGCGCCGCATGCGCGGCAACGACGTGGC
CATGGTCTTCCAGGAGCCCATGACGGCGCTCAACCCGGTGCTCACCATCGGCGACCAGCTCACCGAGGCGCTCCAGCTGC
ACGGCATCGCCTACGGCAAGCAGGCCATGGCCCGCGCCGCCGAGCTGCTGCGCATGGTCGGGATCCCCGAGCCGGAGCGG
CGCCTCAAGCAGTACCCGCACGAGCTCTCGGGCGGCCAGCGCCAGCGCGTCGTCATCGCCATGGCGATCTCGTGCGACCC
GAAGGTCATCATCGCCGACGAGCCGACGACGGCCCTCGACGTGACCGTCCAGGCCGACATCCTCGACCTGCTGCGGTCCC
TCAAGGACAAGCTCAACACGGGCATCCTGCTCATCACCCACAACATGGGCGTCGTGGCCGACATGGCCGACCGCGTCGCC
GTCATGCTCAAGGGCGAGCTCGTCGAGACCGGCACGGCCGAGCAGGTGCTCACCAACCCGCAGCACGAGTACACCAAGCG
GCTGCTCGCCGCGGTCCCGCACCTCGGCGTGGGCCCCGGCCAGCTCGGCGGCGTCGAGCCCGCCGAGGTCAAGCCGGCCC
CGGTCCCGGCGCTCGAGCTGAGCAACCTCGTCATCGAGTACCACCGGCTCGGCAGGCCTCCGTTCCGCGCGGTCGACGAC
GTGTCGTTCACGGTCGCGCAGGGCGAGATCGTCGGCCTGGTGGGGGAGTCCGGCTCGGGCAAGTCGACCATCGGCAAGTG
CGCGCTCGGGCTCATCCCCGCGGCGTCGGGCTCGGTCAAGATCCTCGACCAGGACTACGGGACGCTGAGCCGGAAGCAGC
TCAAGGAGCTGCGCAAGCGCATCGGCGTGGTCTTCCAGGACCCGGCGGCGTCGCTCAACCCGCGCTTCCCGGTCGGCGAG
GCGATCGCCGAGCCGCTCGTCGTGCACAAGGTCGGGGACGCGGCCTCGCGCCGCGACCGCGTCTACGAGCTGCTCGACGC
GGTCGAGCTGCCCCGCTCGTACTACAACAGGTACCCGCACGAGCTGTCGGGCGGCCAGCGCCAGCGCGTCTCGATCGCCC
GCGCGCTCACGCTCGAGCCCGAGCTCCTCGTCGCGGACGAGCCGACGTCGGCGCTCGACGTCTCGGTCCAGGCCGCGGTG
CTCGAGATGTTCACGTCGCTGCAGGAGCGCTACAGGTTCGCGTGCCTGTTCGTGAGCCACGACCTCGCGGTCATCGACCT
CCTCGCCCACAAGGTGGTCGTGCTGCAGGACGGCCGCGTCGTCGAGCAGGGTCCGCGCGAGGAGGTGCTGCACCACCCGC
GCGAGGAGTACACCAAGCGGCTGCTCGCCGCGGCGCCCGTGCCCGACCCGGGCGAGCAGCGCCGACGCCGCGAGGACCGG
CACCGGCTGCTCGCCGAGCTCGGCGACGAGATCGCCGAGCTGCACGTCGACGAGGAGACGCCGGCGCCGCGGGCCGTGCC
CGGCAGCCAGGGGGACAACGCGTCGCGGTTCGGCGGGTTCTTCGGCGGCTGA

Protein sequence :
MTTLDITSSETARSTGDAVLSFEDLGVTFRTEFGDVHAVKGISLEVRPGEVVALVGESGSGKSVTSMTALGLLPSNARVS
GVVRVGDQVVGELDGAGLRRMRGNDVAMVFQEPMTALNPVLTIGDQLTEALQLHGIAYGKQAMARAAELLRMVGIPEPER
RLKQYPHELSGGQRQRVVIAMAISCDPKVIIADEPTTALDVTVQADILDLLRSLKDKLNTGILLITHNMGVVADMADRVA
VMLKGELVETGTAEQVLTNPQHEYTKRLLAAVPHLGVGPGQLGGVEPAEVKPAPVPALELSNLVIEYHRLGRPPFRAVDD
VSFTVAQGEIVGLVGESGSGKSTIGKCALGLIPAASGSVKILDQDYGTLSRKQLKELRKRIGVVFQDPAASLNPRFPVGE
AIAEPLVVHKVGDAASRRDRVYELLDAVELPRSYYNRYPHELSGGQRQRVSIARALTLEPELLVADEPTSALDVSVQAAV
LEMFTSLQERYRFACLFVSHDLAVIDLLAHKVVVLQDGRVVEQGPREEVLHHPREEYTKRLLAAAPVPDPGEQRRRREDR
HRLLAELGDEIAELHVDEETPAPRAVPGSQGDNASRFGGFFGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-101 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-72 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-72 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-72 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-72 43