Gene Information

Name : Isova_0783 (Isova_0783)
Accession : YP_004541463.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 836460 - 837530 bp
Length : 1071 bp
Strand : +
Note : KEGG: xce:Xcel_0400 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI

DNA sequence : 
ATGAGCGGTCCGGCGGCCCCCGGACGCGCGGCGGCCCGGGTCCGCCGGCCGTCGATGGCCGACGTCGCGGCCGTCGCGGG
CGTGTCCCACCAGACGGTCTCGCGCGTGCTCAACGCCCACCCGAGCGTGCGCGGGGAGACGCGCGAGCGTGTCCTGCAGG
CGATCGAGTCCCTCGGCTACCGGCGCAACAGCGCGGCGCGCGCGCTCGCGACGGCGCGCTCGGCGACGCTCGGCGTCGTG
ACGACCGGCTCGGCGCTGTTCGGCCCGACGAGCACGCTCGTGGCGGTCGAGGGCGCCGCCCGCGACGAGGGCTACTTCGT
CTCCGTGGCGACCCTGCGCACCTACGACGCGGCGGCGATGCACGAGGCGCTCGAGCACTTCATGGCCCAGGGCGTCGAGG
GCATCGTCGTCATCGCGCCGCAGGACGACGTCGCCGCGGCGGTCGAGTCGTTCCGCGCGCCCGTGCCCGTCGTTGTCGTC
GCGGCGCTCGAGGACGCCGAGTCGGCGCCCGGCGGTCCCGCGACCCTGTCCCTCGCGGTCGACCAGCGCTCCGGCGCGCG
CCTCGCGACCGACCACCTGCTCGACCTGGGCCACCACGACGTCGTGCACGTGGCCGGTCCGCAGGACTGGTTCGACGCGC
GCGAGCGCGCCGCCGGCTGGCGCGAGGCCCTCGAGGCGCGCGGCGTCACGCCGACGCGCCCGCGCGTGTGCAGCTGGTCG
GCCGACGACGGGTACGCCGCGGGCCGGGACCTCGCCGAGGCCGTCGGCGCGGGGGAGGGGCCGACGGCGGTGCTCGCCGG
CAACGACCAGCTCGCCCTCGGCATCCTGCGCGCCCTGTGGGAGCGGGGGCTCGACGTGCCCGGGGACGTCTCGGTCGTGG
GGTTCGACGACGTCGCGGGCGCCGCGTACTTCGTCCCGCCGCTGACGACCGTGCGTCAACCGTTCGCGCGGCTCGGCGCT
CGCGCCGTCGCGATGGTGCTCGCCGCGCTGGCGGGCGGCGACGTCCCGCCGGAGCGCATCGCGCCCGAGCTCGTGGTGCG
GTCGAGCACCGGGGCGCCGTGCTCGGGCTGA

Protein sequence : 
MSGPAAPGRAAARVRRPSMADVAAVAGVSHQTVSRVLNAHPSVRGETRERVLQAIESLGYRRNSAARALATARSATLGVV
TTGSALFGPTSTLVAVEGAARDEGYFVSVATLRTYDAAAMHEALEHFMAQGVEGIVVIAPQDDVAAAVESFRAPVPVVVV
AALEDAESAPGGPATLSLAVDQRSGARLATDHLLDLGHHDVVHVAGPQDWFDARERAAGWREALEARGVTPTRPRVCSWS
ADDGYAAGRDLAEAVGAGEGPTAVLAGNDQLALGILRALWERGLDVPGDVSVVGFDDVAGAAYFVPPLTTVRQPFARLGA
RAVAMVLAALAGGDVPPERIAPELVVRSSTGAPCSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 3e-40 45