Gene Information

Name : Isova_2965 (Isova_2965)
Accession : YP_004543541.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 3243666 - 3245765 bp
Length : 2100 bp
Strand : -
Note : TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mjl:Mjls_4547 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Ha

DNA sequence :
ATGAGGACCGAAGAGCACACGCGGCACCACCAGCACCACGAGCACCACCAGCACGACCACCAGGATCACGGCGGGGCCGG
GGCGCCCGCCGAGCACGCAGGACACGCCGAGCACACGGGGCACGGCGGGCACGGCGGCGGCCACGGGGACCACGTCGCCG
AGTACCGCCGCCTGTTCTGGACCATGCTCGTGCTGGCCGTCCCGGTCGTCGCGTTCTCGCCGATGTTCGCGATGATCCTC
GGCTACGAGCTGCCCGACGCCGCGTGGGTCCGCTGGGTCTCGCCCGTTCTCGGCACCGTCGTCTTCGCCTGGGGCGGCCG
GCCCTTCCTCGTCGGGGCGGCGTCCGAGCTCCGCGCGCGGCGCCCCGGCATGATGCTGCTCGTCGGGACCGCCATCACGG
TCGCGTTCGTCGCCTCGGCCGGCGCGAGCCTCGGCCTGCTCGACCACCAGCTCGACTTCTGGTGGGAGCTCGCGCTGCTG
GTCGTGATCATGCTGCTCGGCCACTGGATCGAGATGCGCTCGCTCGCGCGGACGACGTCGGCGCTCGACTCGCTCGCGGA
GCTGCTGCCCGACGAGGCCGAGCGCGTCGACGGCGACCAGGTCGCCGTCGTGCCGCCGTCGGACCTCCGGGTGGGCGACG
TCGTCCTCGTCCGCCCGGGCGGCCGCGTCCCGGCCGACGGCCGCGTCGTCGACGGCCGGGCCGAGATGGACGAGTCGATG
ATCACGGGGGAGTCGCGCACCGTGACGCGCGGCGTCGGCGACCAGGTCACGGCCGGCACCGTGGCGACCGACTCGGGCCT
GCGCGTCGAGGTGACCGCGACCGGCGACGACACGGCGCTCGCGGGCATCCGCAAGCTCGTGGCCGACGCCCAGGCGTCGT
CGTCGCGCGCGCAGCGGATCGCCGACGTGGCCGCGGGATGGCTGTTCTGGTTCGCGCTCGGCGCGGCCGCCGTGACCGCC
GTCGTGTGGTCGTTGCTCGGGCTGCCCGACGCCGCGGTCGTGCGGACCGTGACCGTGCTCGTCATCGCGTGCCCCCACGC
GCTCGGCCTGGCGATCCCGCTGGTCGTGTCCATCGCGACCGAGCGCGCCGCCCGGGCCGGCGTCCTGGTCAAGGACCGGC
TCGCCCTCGAGAGCATGCGCACGGTCGACGTGGTCCTGTTCGACAAGACGGGCACGCTCACGCGCGGCGAGTCCGCCGTC
GTCGACGTCGCCACGACCGGCGACCTCGACGCCGACGCGGTGCTGGCGCTCGCGGCGGCCGCCGAGTCGGACAGCGAGCA
CCCGCTCGCCCGCGCGATCGTCGGCGAGGCCGGCGCTCGCGGCCTGTCCGTCCCGCGCGCGGGAGGCTTCGCCTCGGCGC
CCGCGGTCGGCGTGACCGCGACGGTCGACGGACGCGAGGTGCGCGTCGGCGGCCCGCGGCTGCTCGAGGAGCGCCGCCTC
GAGGAGGTCCCCGAGGCCGCGGCCTGGCGCGGCGAGGGCGCGATCGTGCTCCACGTGGTGCGCGACGGCGCGGTCATCGG
TGCGCTGCGCCTCGCCGACCAGGTGCGGCCCGAGTCCGCCGACGCCGTCGCGCAGCTGCGGGCGCGCGGCATCGACGTCG
TCATGATCACCGGTGACGCGGAGGCCGTGGCACGCTCCGTCGCGCGCGAGCTCGGGATCGACCGGTACTTCGCGGGGGTG
CGGCCCGAGGACAAGTCCTCGACCGTGGCCGCGCTCCGGCGCGAGGGCCACCGTGTGGCGATGGTCGGCGACGGCGTCAA
CGACGCCCCGGCGCTCGCGCAGGCCGACGTCGGCATCGCGATCGGCGCGGGCACCGACGTCGCGATCGGGTCGGCCGGGG
TCATCCTCGCCGGCGACGACCCGCGTGCCGTGCTGTCCGTCGTCGACCTGTCGCGGGCGAGCTACCGCACGATGAAGCAG
AACCTCTGGTGGGCCGCCGGGTACAACCTCGTGGCCGTGCCGCTCGCGGCAGGCGTCCTCGCGCCGGTCGGGTTCGTCAT
GCCGATGTCGGTGGGCGCGCTGCTCATGTCGCTGTCGACCGTGGTCGTGGCGCTCAACGCGCAGCTGCTGCGCCGACTCG
ACCTGCGACCGTCGCGCTGA

Protein sequence :
MRTEEHTRHHQHHEHHQHDHQDHGGAGAPAEHAGHAEHTGHGGHGGGHGDHVAEYRRLFWTMLVLAVPVVAFSPMFAMIL
GYELPDAAWVRWVSPVLGTVVFAWGGRPFLVGAASELRARRPGMMLLVGTAITVAFVASAGASLGLLDHQLDFWWELALL
VVIMLLGHWIEMRSLARTTSALDSLAELLPDEAERVDGDQVAVVPPSDLRVGDVVLVRPGGRVPADGRVVDGRAEMDESM
ITGESRTVTRGVGDQVTAGTVATDSGLRVEVTATGDDTALAGIRKLVADAQASSSRAQRIADVAAGWLFWFALGAAAVTA
VVWSLLGLPDAAVVRTVTVLVIACPHALGLAIPLVVSIATERAARAGVLVKDRLALESMRTVDVVLFDKTGTLTRGESAV
VDVATTGDLDADAVLALAAAAESDSEHPLARAIVGEAGARGLSVPRAGGFASAPAVGVTATVDGREVRVGGPRLLEERRL
EEVPEAAAWRGEGAIVLHVVRDGAVIGALRLADQVRPESADAVAQLRARGIDVVMITGDAEAVARSVARELGIDRYFAGV
RPEDKSSTVAALRREGHRVAMVGDGVNDAPALAQADVGIAIGAGTDVAIGSAGVILAGDDPRAVLSVVDLSRASYRTMKQ
NLWWAAGYNLVAVPLAAGVLAPVGFVMPMSVGALLMSLSTVVVALNAQLLRRLDLRPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 5e-71 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Isova_2965 YP_004543541.1 copper-translocating P-type ATPase BAC0629 Protein 1e-107 45
Isova_2965 YP_004543541.1 copper-translocating P-type ATPase BAC0101 Protein 1e-67 42
Isova_2965 YP_004543541.1 copper-translocating P-type ATPase BAC0383 Protein 4e-95 41
Isova_2965 YP_004543541.1 copper-translocating P-type ATPase BAC0079 Protein 3e-108 41