Gene Information

Name : Isova_2917 (Isova_2917)
Accession : YP_004543496.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3201911 - 3202810 bp
Length : 900 bp
Strand : +
Note : KEGG: ica:Intca_0184 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGATCACCGTGGAGCACCTGACCAAGAGATACGGCCCGGTCGTGGCCGTGGACGACGTGTCGTTCACGGCCACCCCCGG
CCACGTCACCGGCTTCCTCGGCCCCAACGGCGCCGGGAAGTCCACGACGATGCGCATGATGTGCGGGCTCACGCCGGCGA
CGTCGGGCACCGCCCGCGTGCTCGGCGTCCCGTTCGCGGCGCTCGCCAACCCGGGCCGCCGCGTCGGCGTCCTGCTCGAC
GCCTCGGCGCAGCACGCCGGGCGCACCGGTCGCGAGGTGCTCACGCTCGCCGCGCTGCTCACGGGCGTGGACCGGCGCCG
GGTCGACGCGGTGCTCGACCTCGTGGGGCTCACCGAGAAGGAGGCGGCCCGCCGCGTCGGCTCGTACTCGCTCGGCATGC
GCCAGCGCCTGGGCATCGCGTCCGCGCTGCTCGGCGACCCCGAGGTGCTCATCCTCGACGAGCCCGCCAACGGGCTCGAC
CCCGCGGGCATCCGCTGGATGCGCGACCTGCTCCAGGACTTCGCCGCTCACGGCGGCACCGTGCTGCTCAGCTCCCACCT
GCTCCACGAGATCGAGCAGGTCGCCGACCGGCTCGTCGTCATCGGCCGCGGCCGCATCGTCGCCCAGGGCGCCAAGGACG
ACCTGCTGCGCCGCGCCGGCACGTTCGCGCGCTCCGAGGACGACGCCGCGCTCGTCGCGGCTCTCACCGCCGCGGGCATC
ACCGCGGAGCCCTTGGCCACGGGCGGCGTCGACGCCCAGGCCGAGCCCGCCGCCGTCGCGCGCGCCGCGAGCGCCGCCGG
CGTCGTCGTGACCGAGCTGCGGGCCGCCGACTCGCGCGGCCTGGAAGACCTGTTCCTCGAGCTCACCGCCGGGGACGCGC
GCGAGGAGGTGTCGGCATGA

Protein sequence :
MITVEHLTKRYGPVVAVDDVSFTATPGHVTGFLGPNGAGKSTTMRMMCGLTPATSGTARVLGVPFAALANPGRRVGVLLD
ASAQHAGRTGREVLTLAALLTGVDRRRVDAVLDLVGLTEKEAARRVGSYSLGMRQRLGIASALLGDPEVLILDEPANGLD
PAGIRWMRDLLQDFAAHGGTVLLSSHLLHEIEQVADRLVVIGRGRIVAQGAKDDLLRRAGTFARSEDDAALVAALTAAGI
TAEPLATGGVDAQAEPAAVARAASAAGVVVTELRAADSRGLEDLFLELTAGDAREEVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 4e-43 45
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 4e-38 45
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 4e-38 45
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 3e-40 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 3e-43 42