Gene Information

Name : Isova_2878 (Isova_2878)
Accession : YP_004543457.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : monosaccharide-transporting ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.17
Position : 3157245 - 3158936 bp
Length : 1692 bp
Strand : -
Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: xce:Xcel_3261 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGACCGTCAGCCCCGCGGGCCCGGTGGCCCGCATCGACGACCTCGCGGTCTCGTTCGCGACCGACGCCGGCCCGGTGCG
CGCCGTCGACGGCGTGAGCCTCGAGGTGGCACCCGGGGAGGTGCTCGCCATCGTCGGCGAGTCCGGCTCGGGCAAGACGG
TCACGGCCAAGACGATCCTCGGCCTGCTGCCGGAGACCGCGACGACGAGCGGGGCCGTCCTGCTCTCCGGCCGTGACGGC
GAGACCGACGTCGTGTCCGTCTCCGGTGCGCGCCTGCGCGAGGTGCGGGGCCGCGACGTGGCGATGGTGTTCCAGGAGCC
GTCGACCGCCCTCAACCCGGTCTTCACGGTCGGCTGGCAGATCGCCGAGGGCCTCCGGGCGCACGGGACCGTCTCCAAGA
GGCAGGCGCGCGAGCGCGCGATCGAGGTGCTGCGGACCGTCGGCATCCCGGACCCGGAGCACCGGGTCGACCACTACCCG
CACCAGTTCTCGGGCGGTCAGAAGCAGCGCATCGTCATCGCCATGGCGCTGGTGCTCAACCCGGGACTCATCGTCGCGGA
CGAGCCGACGACCGCGCTCGACGTCACCGTGCAGGCCGAGATCCTCGACCTCCTGCGCCGGCTGCGCGACGAGACCGGCA
CGGCGATCGTGCTCATCACGCACAACATGGGCGTCGTCGCCGACCTCGCCGACCGCGTCGCGGTCATGTACCAGGGCCGG
CTCGTCGAGCAGGCGCCCGTCGCCGAGCTCTTCGCGAACCCGCAGGCCGACTACACGCGCGCGCTCCTCAAGTCCGTGCC
GCGCGTGGGGGAGGGCACGGCGCGCGCCGCGGCCCGCGCGGCCGCACGTCCGGACGGCTGGGCGGAGTCCGAGCCCGTCG
TGCGGGCCGAGCACCTGACGATCACCTACCCGGGGCGCTTCCGGCGGCCGGCGTTCACCGCGGTCGACGACGTGTCGCTG
ACCATCAGGCCCGGCGAGGTGCTCGGCCTCGTGGGCGAGTCGGGCTCGGGCAAGACGACGATCGCCCGCGCGATCGCCGG
GCTGACGCCGGTGACGGGCGGGTCGCTGCGCGTCCTCGGCACCGAGATGCGCGGGGCCCGCGGACGCGACCTCGCCGGCA
TGCGCCCGCGGCTCGGCTTCGTCTTCCAGGACCCCGCGACGTCGTTCAACCCGCTGCTGACGATCGCGGAGTGCGTCGCC
GAGCCGCTCGTCGTGCACGGGCGTGCGGCGTCGCCCGAGGCGGCGCGCGGCCGGGTCGACGAGCTGCTCGAGGCCGTCCA
GCTGCCGCGCTCCTACGGCGACCGCTTCCCCCACGAGCTCTCGGGCGGCCAGCGCCAGCGCGCGTCCCTCGCGCGGGCGC
TCGCGCTCGACCCCGAGCTGCTCGTGGCCGACGAGCCGACGTCGGCGCTCGACGTGTCGGTGCAGGCCCGCGTGCTCGAG
CTCTTCGCCGAGCTGCAGCGCGAGCTCGGGTTCGCGTGCCTCTTCGTGTCGCACGACCTGGCCGTGGTCGACCTGCTCGC
CGACAGGATCGCGGTGCTCTACCGCGGCCGGCTCGTCGAGGAGGGGACCGGCGTCGAGGTGCTCGGCGCGCCGCGCGAGG
AGTACACCCGTCGGCTGCTCGCGTCCCTGCCCGTGCCCGACCCGGTGGCCCAGGCCGAGCGGCGCGAGGCGCTCCGCGCC
CTGACGACGTAG

Protein sequence :
MTVSPAGPVARIDDLAVSFATDAGPVRAVDGVSLEVAPGEVLAIVGESGSGKTVTAKTILGLLPETATTSGAVLLSGRDG
ETDVVSVSGARLREVRGRDVAMVFQEPSTALNPVFTVGWQIAEGLRAHGTVSKRQARERAIEVLRTVGIPDPEHRVDHYP
HQFSGGQKQRIVIAMALVLNPGLIVADEPTTALDVTVQAEILDLLRRLRDETGTAIVLITHNMGVVADLADRVAVMYQGR
LVEQAPVAELFANPQADYTRALLKSVPRVGEGTARAAARAAARPDGWAESEPVVRAEHLTITYPGRFRRPAFTAVDDVSL
TIRPGEVLGLVGESGSGKTTIARAIAGLTPVTGGSLRVLGTEMRGARGRDLAGMRPRLGFVFQDPATSFNPLLTIAECVA
EPLVVHGRAASPEAARGRVDELLEAVQLPRSYGDRFPHELSGGQRQRASLARALALDPELLVADEPTSALDVSVQARVLE
LFAELQRELGFACLFVSHDLAVVDLLADRIAVLYRGRLVEEGTGVEVLGAPREEYTRRLLASLPVPDPVAQAERREALRA
LTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-96 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-64 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-64 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-64 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-64 42