Gene Information

Name : Isova_2860 (Isova_2860)
Accession : YP_004543440.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3141309 - 3142403 bp
Length : 1095 bp
Strand : +
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: xce:Xcel_3252 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence :
GTGAGCACCCCCGCAGAGCCCGGAACCGCACCGCTGCGCCTCGGCACCCGGGGCAGCGCGCTCGCCATGACGCAGTCGGG
CATGGTCGCGCGCCGGCTCACCGAGCTCCTGGGCAGGCCCGTGGAGCTCGTGCGCATCCGCACCGAGGGCGACGTGAAGA
CCGGGTCGCTCGCGTCGCTCGGCGGCACCGGCGTGTTCGTCACGGCCCTGCGCGAGGCGCTGCTCGACGGCCGCTGCGAC
GTCGCCGTCCACTCGCTCAAGGACCTGCCCACGACCCAGCCGCCCGAGCTCACCGTCGTGACGCCCGAGCGCGAGGACCC
GCGCGACGTGCTGTGCGCGCGGGACGGTCTCACGCTCGAGACGCTGCCGCGCGGGTCCCGCGTGGGCACCGGCTCGCCGC
GGCGTGCGGCACAGCTCAAGGCCGCGCGCCCCGACGTCGAGATCGTCGACATCCGGGGCAACGTCGACACGCGCCTCGCC
CGCGCGCTCGGACCTGAGGCCGACCTCGACGCGGTCGTGCTCGCGCACGCCGGGCTGACCCGGCTGGGCCGCACCGACGT
GGTCACCGAGGTCCTGCCGCCCGGCGTGGTCGCGCCCGCCCCGGGCCAGGGGGCGCTCGCGGTCGAGGCGCGCACGGCCG
ACCTGCAGCCGGGCGCCCCCGACGGCGGTGCGCTCGCCCGCGCGTTCGCCGCGCTCGACCACCGCGCGACGCGCGTCGCC
GTGATCGCCGAGCGGACCGTCCTGGCCCGGCTCGAGGCCGGGTGCGCCGCGCCCGTCGGGGCGTACGCGCGCGTCGAGGA
CGGCGCGCTGCACCTCGGGGCGGTCGTCGCGCGCGTCGACGGCACCGAGCAGCTCAAGCACCGCGCGAGCGTCGAGCTCG
CGGCCGAGATGTCGACCGCCGCGCTCGACGCCGTCGCCACCGAGCTCGGCGAGCGCGTGGCCGAGGCGCTGCTGGCCGAC
GGCGCCGACCGGCTCGCACCGCTGCGTCCCGGCACGTCCGCCGCGAGCCCGGAGCTGCCCACGGGCGCCTCGCGCCGGGT
CGACAGCGCTCCGCTGCACTCCCCGACCGGCACCGACGACCCGGAGGGTGCGTGA

Protein sequence :
MSTPAEPGTAPLRLGTRGSALAMTQSGMVARRLTELLGRPVELVRIRTEGDVKTGSLASLGGTGVFVTALREALLDGRCD
VAVHSLKDLPTTQPPELTVVTPEREDPRDVLCARDGLTLETLPRGSRVGTGSPRRAAQLKAARPDVEIVDIRGNVDTRLA
RALGPEADLDAVVLAHAGLTRLGRTDVVTEVLPPGVVAPAPGQGALAVEARTADLQPGAPDGGALARAFAALDHRATRVA
VIAERTVLARLEAGCAAPVGAYARVEDGALHLGAVVARVDGTEQLKHRASVELAAEMSTAALDAVATELGERVAEALLAD
GADRLAPLRPGTSAASPELPTGASRRVDSAPLHSPTGTDDPEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-36 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-36 42