Gene Information

Name : Isova_2644 (Isova_2644)
Accession : YP_004543241.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : Lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 2888189 - 2889724 bp
Length : 1536 bp
Strand : -
Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: xce:Xcel_2977 lysyl-tRNA synthetase

DNA sequence :
GTGACCTCCCCGCAGAACGCCCCCTCCGTCGTGCCCGCGGACGGCGAGAACGCCGTCGACGACCTGCCCGAGCAGCTGCG
CGTCCGTCGCGAGAAGCGCGAGCGCCTGCTCGCGCGGGGTGTCGAGCCGTACCCGGTGTCGGTGCCGGTCACGCACACGA
TCGCCCAGGTCCGCGAGGGCTACGGCCACCTCGCCGCGGGCGAGGAGACCGACGACGTCGCAGGCGTCGCGGGGCGCGTC
GTCTTCCTGCGCAACACGGGCAAGCTCTGCTTCGTCACGCTGCAGGACGGCGAGGGGAACCGTCTGCAGGCGATGCTGAG
CCAGGCCGTGGTGGGGGAGGAGTCGCTGTCGGACTTCAAGGCCGACGTCGATCTGGGCGACCACCTGTTCGTGCACGGCC
GGATCGGTGCCTCGCGCCGCGGCGAGCTGAGCATCTTCGCGGACGCGTGGCAGATGGCGGCCAAGGCGCTGCGCCCGCTG
CCGGTGCTGCACAAGGACCTGTCGGAGGAGGCCCGGGTCCGCCAGCGCTACGTCGATCTCATCGCGCGGCCGGCCGCCCG
CGAGATGGTCCGCCTGCGTTCCGGTGTGGTGCGTTCTTTGCGCGACAACTTCCACCGCCGCGGCTTTCTCGAGATCGAGA
CGCCGATGCTGCAGACCGTTGCCTCGGGTGCGGCCGCGCGTCCTTTCTCGACGCACATGAATGCGTACGACATCGACCTG
TTCCTGCGCATCGCGCCGGAGCTGTTCCTCAAGAAGGCGGTCGTGGGCGGTGTCGAGAAGGTGTTCGAGATCAACCGCAA
CTTCCGCAACGAAGGAGCGGACTCGACGCACTCTCCCGAGTTCGCGATGCTCGAGGCGTACGAGGCGTACGGGGATTACA
ACTCGATCGGCGCGCTCACCCAGGACCTCGTGCAGACGGCGGCGAAGGAGGTTCTCGGCACCACGGTCGTGACCCTCCCG
GACGGCGAGGAGTACGACCTCGGCGGCGAGTGGGCGCAGATCACGATGTACGGGTCGCTGTCGGAGGCGCTCGGCGAGGA
GATCACGCCCGACACGTCGGTCGAGCACCTGCTGTCGCTCGCCGAGAAGGCCGAGCTCTCGCTCGACCCGAAGAAGGCGA
ACCACGGCAAGCTCGTCGAGGAGCTGTGGGAGCACCACGTCGGGGACACGCTGCACGCGCCGACGTTCGTGCGGGACTTC
CCGGTCGAGACGTCGCCCCTGGTGCGCGCGCACCGCAGCATCCCGGGCGTCGTCGAGAAGTGGGACCTCTACGTGCGCGG
GTTCGAGCTGGCCACGGGGTACTCGGAGCTCGTCGACCCGGTCGTCCAGCGCGAGCGCTTCGCCGCGCAGGCGAGGCTCG
CGGCGGCCGGCGACGACGAGGCCATGGCGCTCGACGAGGACTTCCTCGTCGCGATGGAGCACGCGATGCCGCCGTCCGGT
GGAATGGGCATGGGTATCGACCGTCTTCTCATGGCGCTCACCGGGCTCGGAATCCGCGAGACCATCCTCTTTCCGCTCGT
CAAGCCGACGGCCTGA

Protein sequence :
MTSPQNAPSVVPADGENAVDDLPEQLRVRREKRERLLARGVEPYPVSVPVTHTIAQVREGYGHLAAGEETDDVAGVAGRV
VFLRNTGKLCFVTLQDGEGNRLQAMLSQAVVGEESLSDFKADVDLGDHLFVHGRIGASRRGELSIFADAWQMAAKALRPL
PVLHKDLSEEARVRQRYVDLIARPAAREMVRLRSGVVRSLRDNFHRRGFLEIETPMLQTVASGAAARPFSTHMNAYDIDL
FLRIAPELFLKKAVVGGVEKVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNSIGALTQDLVQTAAKEVLGTTVVTLP
DGEEYDLGGEWAQITMYGSLSEALGEEITPDTSVEHLLSLAEKAELSLDPKKANHGKLVEELWEHHVGDTLHAPTFVRDF
PVETSPLVRAHRSIPGVVEKWDLYVRGFELATGYSELVDPVVQRERFAAQARLAAAGDDEAMALDEDFLVAMEHAMPPSG
GMGMGIDRLLMALTGLGIRETILFPLVKPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 2e-131 61