Gene Information

Name : Isova_2485 (Isova_2485)
Accession : YP_004543090.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2716265 - 2717179 bp
Length : 915 bp
Strand : +
Note : KEGG: xce:Xcel_2673 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGATCGAGGCTCGAGGCCTGTCGAAGCGGTACGGCGAGAAGCTCGCCGTCGACGACGTGACGTTCACCGTGCGGCCGGG
CGTCGTGACCGGCTTCCTCGGCCCGAACGGCGCGGGCAAGTCGACGACGATGCGCATGATCCTGGGCCTGGACCGCCCCA
CCGCGGGGACCGTCACGATCGAGGGCCGCCGCTACGCCGAGCACCGCGCGCCGCTCGCGGAGGTCGGTGCGCTGCTCGAG
GCCAAGGCCGTGCACCCCGGGCGCACCGCGCGCCAGCACCTGCAGGCGCTCGCCGCGACGCACGGCATCCCGACCACGCG
GGTGGACGAGGTCATCGATCTCACGGGCCTGACCGCCGTCGCACGCAAGCGGGTGGGCGGCTTCTCGCTCGGCATGGGCC
AGCGGCTCGGCATCGCCGTCGCGCTGCTCGGCGACCCGCGCACGCTCCTCCTCGACGAGCCGGTCAACGGCCTCGACCCC
GAGGGCGTCCTGTGGGTCCGCAACCTCACCCGCTACCTCGCCGAGCAGGGCCGCACGGTGTTCCTGTCGAGCCATCTCAT
GAGCGAGGTCGCGCTCACCGCGGACCACGTGCTCGTCATCGGCCGGGGCCGCATCCTCGCGGACACGCCCGTGCGGGACC
TGGTCGACGGCGCCTCGCGCCGGCACGTGCGCGTGCGGACGCCGCACGGCACCGCGCTGACGGAGGCGGTGCGTCGCGAG
GGCGCCGACGTCGAGGCGTCCGACGACGGCGCTCTGGACGTCGCGGGTCTCGACGCCGCGCGGGTCGGCGAGCTCGCGGC
GGCGGCCGGCGTCGTGCTGCACGAGCTCACGCCCGTGCGGACCACGCTCGAGGACGCCTACATGGGGCTCACCGCCGACG
CCGTCGAGTATCACGCCGAGGCGGTGGGGCCGTGA

Protein sequence :
MIEARGLSKRYGEKLAVDDVTFTVRPGVVTGFLGPNGAGKSTTMRMILGLDRPTAGTVTIEGRRYAEHRAPLAEVGALLE
AKAVHPGRTARQHLQALAATHGIPTTRVDEVIDLTGLTAVARKRVGGFSLGMGQRLGIAVALLGDPRTLLLDEPVNGLDP
EGVLWVRNLTRYLAEQGRTVFLSSHLMSEVALTADHVLVIGRGRILADTPVRDLVDGASRRHVRVRTPHGTALTEAVRRE
GADVEASDDGALDVAGLDAARVGELAAAAGVVLHELTPVRTTLEDAYMGLTADAVEYHAEAVGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 6e-44 47
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 6e-44 47
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 5e-47 44
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 1e-41 41
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 1e-41 41