Gene Information

Name : Isova_1966 (Isova_1966)
Accession : YP_004542597.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 2119281 - 2120162 bp
Length : 882 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: xce:Xcel_2174 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACGGACGTCCGCACCTCCCCCGCCCCCGTCGCGACCCTGCCCTCGACCGGCGAGCCCGTCGGCGTGCCGGCCGCCGG
GGCGCCGCAGGGCGCCCCGCTGCGCGCGCACGGCGTGAGCATCGGCTACGACGGCCGCCGCGTCATCGAGGACCTCGACC
TCGAGCTTCCGGCGGGCCGCGTGACGGCCATCGTGGGCCCCAACGCGTGCGGCAAGTCGACGCTGCTGCGCGGCCTGGCA
CGGCTGCACCCCCTCACCTCCGGCCGCGTGACCCTCGGCGACCGCGACGTCACCGGGATGTCGCGCAAGGAGCTCGCCAA
GGTCGTCGGCGTGCTCCCGCAGTCGTCCGTCGCACCCGACGGCGTCCGGGTCGCCGAGCTCGTGGGCCGCGGCCGGTACC
CGCACCAGGGATGGTTCGGCCGGCACCGCAGCGACGACGACGCCGTCGTCATGCGTGCGCTCGAGGCCACGGGCACGGCC
GACCTCGCCGACCGTCCGGTCGCCGAGCTCTCCGGCGGCCAGCGCCAGCGCGTCTGGATCGCGATGGTGCTCGCGCAGGA
GACCGACGTCGTGCTTCTCGACGAGCCGACGACGTACCTCGACGTGGCGCACCAGGTCGAGCTGCTCGACCTCCTGCGCG
ACCTCAACCACGAGCGCGGCACGACCGTCGTCATGGTGCTGCACGAGCTCAACCTCGCGGCCCGCTACGCCGACCACCTC
GTCGTCATGAGCGCCGGGCGCGTCGTCGGGCAGGGCGAGCCGTCGCGCGTGCTCACCGAGGACGCCGTGCTCGGCGCGTT
CGGGCTCGAGTCCCGCGTCGTGCCGGACCCGGTGTCCGGGACGCCGCTCGTGGTCCCCGTGGGGCGGCACCGCCGCGCCT
GA

Protein sequence : 
MTDVRTSPAPVATLPSTGEPVGVPAAGAPQGAPLRAHGVSIGYDGRRVIEDLDLELPAGRVTAIVGPNACGKSTLLRGLA
RLHPLTSGRVTLGDRDVTGMSRKELAKVVGVLPQSSVAPDGVRVAELVGRGRYPHQGWFGRHRSDDDAVVMRALEATGTA
DLADRPVAELSGGQRQRVWIAMVLAQETDVVLLDEPTTYLDVAHQVELLDLLRDLNHERGTTVVMVLHELNLAARYADHL
VVMSAGRVVGQGEPSRVLTEDAVLGAFGLESRVVPDPVSGTPLVVPVGRHRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-65 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-54 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-57 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-57 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-57 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-57 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-51 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-65 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-65 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 44
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 2e-32 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Isova_1966 YP_004542597.1 iron-chelate-transporting ATPase BAC0164 Protein 2e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Isova_1966 YP_004542597.1 iron-chelate-transporting ATPase VFG0925 Protein 8e-67 51
Isova_1966 YP_004542597.1 iron-chelate-transporting ATPase VFG1042 Protein 2e-54 47