Gene Information

Name : Isova_1863 (Isova_1863)
Accession : YP_004542503.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Virulence
Product : type I glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2008773 - 2010197 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: glutamine synthetase type I; KEGG: xce:Xcel_2038 glutamine synthetase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp

DNA sequence : 
ATGTTCACCAACGCCGAGGAGGCCATCGCCTTCACCCGCAACGAGGGGGTGGAGTTCATCGACGTCCGGTTCATCGACCT
GCCGGGCGTGATGCAGCACTTCAACATCCCCGTCGAGCAGTTCTCCGAGGACTCGTTCACCGAGGGGCTCATGTTCGACG
GGTCGTCGATCCGCGGCTTCCAGGCGATCCACGAGTCGGACATGAAGCTGGTACCCGACGTCAAGACCGCCTTCATCGAC
CCGTTCCGCAAGCGCAAGACGCTGGTGATCAACTTCTCCATCGTCGACCCCTTCACGGACGAGCCGTACGACCGCGACCC
GCGCAACATCGCCGCCAAGGCCGAGGCCTACCTCGCGTCGACCGGCATCGCGGACACCGCGTACTTCGCGCCCGAGGCCG
AGTTCTACGTCTTCGACGACGCGCGCTTCGAGACGAACTCGCACCGCAGCTTCTACCAGATCGACTCGGTCGAGGCAGCG
TGGAACACCGGTCGCGAGGAGGAGGGCGGCAACCTCGCGTACAAGACGCGCTACAAGGGCGGCTACTTCCCCGTCTCGCC
GTCGGACCGCTTCGCGGACCTCCGTGACGACATGGTCGCCACGCTCGGCCAGGTGGGTCTCGACGTCGAGCGCGCGCACC
ACGAGGTGGGCACGGCCGGCCAGCAGGAGATCAACTACCGCTTCAACACCCTGCTGCACGCGGCCGACGACCTCATGAAG
TTCAAGTACGTCATCCGCAACGTCGGCTTCAACGCCGGCAAGTCGGTGACGTTCATGCCGAAGCCGATCTTCGGCGACAA
CGGCTCGGGCATGCACTCGCACCAGTCCCTGTGGCTGAACGGCGAGCCGCTGTTCTACGACGAGAAGGGCTACGGCGGCC
TGTCCGACACGGCCCGCTGGTACATCGGCGGCCTGCTCAAGCACGCCCCGTCGCTGCTGGCGTTCACCAACCCGTCGGTG
AACTCGTACCACCGCCTGGTCCCGGGCTTCGAGGCGCCCGTCAACCTCGTGTACTCGGCCCGCAACCGCTCCGCGTGCAT
CCGCATCCCGGTCACCGGCTCGTCGCCGAAGGCCAAGCGCGTCGAGTTCCGCGTGCCGGACCCGTCGAGCAACCCGTACC
TCGCGTTCTCCGCGATGCTGCTCGCCGGCATCGACGGCATCAAGAACCGCACCGAGCCGCCGGCGCCGGTCGACAAGGAC
CTCTACGAGCTGCCGCCCGAGGAGCACGCGCAGATCGCCCAGGTCCCGGCGTCGCTCGGCGAGGCGCTCGACAACCTCGA
GCGCGACCACGAGTTCCTCACGCAGGGTGACGTCTTCTCCGAGGACCTCATCTCGACGTGGATCGACTACAAGCGCGCCA
ACGAGATCGACCCGATCCGCCTGCGCCCGCACCCGCACGAGTTCGAGCTGTACTACGACATCTGA

Protein sequence : 
MFTNAEEAIAFTRNEGVEFIDVRFIDLPGVMQHFNIPVEQFSEDSFTEGLMFDGSSIRGFQAIHESDMKLVPDVKTAFID
PFRKRKTLVINFSIVDPFTDEPYDRDPRNIAAKAEAYLASTGIADTAYFAPEAEFYVFDDARFETNSHRSFYQIDSVEAA
WNTGREEEGGNLAYKTRYKGGYFPVSPSDRFADLRDDMVATLGQVGLDVERAHHEVGTAGQQEINYRFNTLLHAADDLMK
FKYVIRNVGFNAGKSVTFMPKPIFGDNGSGMHSHQSLWLNGEPLFYDEKGYGGLSDTARWYIGGLLKHAPSLLAFTNPSV
NSYHRLVPGFEAPVNLVYSARNRSACIRIPVTGSSPKAKRVEFRVPDPSSNPYLAFSAMLLAGIDGIKNRTEPPAPVDKD
LYELPPEEHAQIAQVPASLGEALDNLERDHEFLTQGDVFSEDLISTWIDYKRANEIDPIRLRPHPHEFELYYDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-91 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Isova_1863 YP_004542503.1 type I glutamine synthetase VFG1399 Protein 2e-161 66