Gene Information

Name : Isova_1659 (Isova_1659)
Accession : YP_004542305.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1792232 - 1793143 bp
Length : 912 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: xce:Xcel_1662 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
GTGAGCGAGAGCACGGTGAGCACCGGCGTCGGCCAGGTCGGCACGGCGCGCGTCAAGCGCGGCATGGCCGAGATGCTCAA
GGGCGGCGTCATCATGGACGTCGTGACGCCCGAGCAGGCGAAGATCGCCGAGGACGCGGGCGCCGTCGCGGTCATGGCGC
TCGAGCGCGTGCCCGCCGACATCCGCGCCCAGGGCGGCGTGGCGCGCATGAGCGACCCCGACATGATCGAGGGCATCATC
GACGCCGTCTCGATCCCCGTCATGGCCAAGGCCCGCATCGGCCACTTCGTCGAGGCGCAGGTGCTGCAGTCCCTCGGCGT
CGACTACGTCGACGAGTCCGAGGTCCTCACGCCCGCGGACTACGCGCACCACATCGACAAGTGGCAGTTCACGGTCCCGT
TCGTGTGCGGCGCGACCAACCTCGGCGAGGCCCTGCGCCGCATCACCGAGGGCGCGGCGATGATCCGCTCCAAGGGCGAG
GCCGGCACCGGCGACGTCTCCAACGCGACGACGCACATGCGCCAGATCCGCGCGCAGATCCGCCGCCTGTCGTCCCTGCC
CACCGACGAGCTCTACGTCGCGGCCAAGGAGCTGCAGGCGCCGTACGAGCTCGTCAAGGAGGTCGCCGAGACGGGCAAGC
TCCCCGTGGTGCTCTTCACCGCCGGCGGCATCGCGACGCCCGCCGACGCGGCGATGATGATGCAGCTCGGCGCCGAGGGC
GTCTTCGTCGGCTCCGGCATCTTCAAGTCGGGCGACCCCGTCGCCCGCGCCAAGGCCATCGTCCAGGCCACGACGTTCTT
CGACGACCCCGACGTCATCGCGAAGGTCTCGCGCGGCCTCGGCGAGGCCATGGTCGGCATCAACGTCGAGGCCGAGCCCG
AGCCGGTGCGGCTCGCGGAGCGCGGTTGGTGA

Protein sequence : 
MSESTVSTGVGQVGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVARMSDPDMIEGII
DAVSIPVMAKARIGHFVEAQVLQSLGVDYVDESEVLTPADYAHHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGE
AGTGDVSNATTHMRQIRAQIRRLSSLPTDELYVAAKELQAPYELVKEVAETGKLPVVLFTAGGIATPADAAMMMQLGAEG
VFVGSGIFKSGDPVARAKAIVQATTFFDDPDVIAKVSRGLGEAMVGINVEAEPEPVRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-114 82
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-113 82
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-114 81