Gene Information

Name : Isova_1506 (Isova_1506)
Accession : YP_004542161.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1641929 - 1643026 bp
Length : 1098 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: ami:Amir_3982 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGACGGCGGCCACCACGACGGGGCCCACCACGAGCGAGGCCGAACGGGCCGCGATGCGGCGCGCCCTGGCCCTCGCCGC
GACCCCGGGACGGCTGCCCGGTCCCAACCCGCGCGTCGGCTGCGTCCTGCTCGCGCCCGACGGCGGCGTCGTCGCCGAGG
GGTTCCACCGCGGTGCCGGCACCCCGCACGCCGAGGCGGACGCCCTCCTGCGGGCCCGCGCGGCCGCCGGGCCCGACGCC
GCGCGCGGCGCGACCGCCGTCGTCACGCTCGAGCCGTGCGCGCACCGCGGCCGCACCGGCCCGTGCGCCGAGGCGCTCGT
CGAGGCCGGCGTGGCGCGCGTCGTCTTCGCCCAGCCCGACCCCAACCCCGTGGCCGCCGGCGGCGCCGCGGTCCTGCGCG
ACGCCGGGATCGACGTCGTCGGTGGCCTCCTCGCCGACGAGGCGCGCGCCCTCAACGCGACGTGGACCCGCGCGATGGAG
CTCGGCCGGCCCGTCGTCACGTGGAAGGTCGCCGCGAGCCTCGACGGCCGCACCGCCGCCGCGGACGGCTCGTCCCGGTG
GATCTCGAGCGCCGCCGCGCGCCGGGACGCGCACGCGCTGCGCTCCGCCGTGGACACCGTGCTCGTCGGCACGGGCACGC
TGCTCGCCGACGACCCGGCGCTGACCGTGCGCGACGCCGCGACGGCGGGCGCCGCCGTGTCGCAGCCGCTGCGTGCGGTC
ATGGGGCGCACCGACGTGCCGGCGTCGGCCCGGGTGCGCGGCGACGGTGCGCCCGCGGGCGACCCGGGATGGGTGCACCT
GCGCACGCGCGACCCGCGGGTCGCGCTGGCCGAGCTGTGGGCGCTCGAGCGCCGGCACGTGCTGCTCGAGGGCGGGCCGC
GGCTCGCCGCCGCGTTCTGGCGCGCCGGGCTCGTCGACGAGCTCGTCGTCTACGTCGCACCGGTGCTGCTCGGCGCCGGC
CCCGCCGCCGTCGCGGACCTCGGCATCACCACCATCTCCGACGCTGCGCGCCTCGAGGTCACGGACGTCACCGTGCTCGA
GGCCCCGGGCGAGGACACGAACGTGCGGCTGACCCTGCGGCCGCGGAAGGAGGGCTGA

Protein sequence :
MTAATTTGPTTSEAERAAMRRALALAATPGRLPGPNPRVGCVLLAPDGGVVAEGFHRGAGTPHAEADALLRARAAAGPDA
ARGATAVVTLEPCAHRGRTGPCAEALVEAGVARVVFAQPDPNPVAAGGAAVLRDAGIDVVGGLLADEARALNATWTRAME
LGRPVVTWKVAASLDGRTAAADGSSRWISSAAARRDAHALRSAVDTVLVGTGTLLADDPALTVRDAATAGAAVSQPLRAV
MGRTDVPASARVRGDGAPAGDPGWVHLRTRDPRVALAELWALERRHVLLEGGPRLAAAFWRAGLVDELVVYVAPVLLGAG
PAAVADLGITTISDAARLEVTDVTVLEAPGEDTNVRLTLRPRKEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-32 41
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-32 41