Gene Information

Name : Isova_1496 (Isova_1496)
Accession : YP_004542151.1
Strain : Isoptericola variabilis 225
Genome accession: NC_015588
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 1630492 - 1632618 bp
Length : 2127 bp
Strand : -
Note : TIGRFAM: transketolase, bacterial-like; KEGG: xce:Xcel_1557 transketolase; PFAM: transketolase, N-terminal; transketolase-like, pyrimidine-binding domain; transketolase, C-terminal

DNA sequence :
GTGAACGCGTTCGACCCCGCACTCACGCCGCTCGAGTGGACCGAGCTCGACGACCGCGCCGTGAAGACGATCAAGGCGCT
CGCGGCCGACGCCGTGGAGAAGGTCGGCAACGGCCACCCGGGCACCGCGATCTCGCTCGCGCCGGCCGCGTACCTGCTGT
TCCAGAAGGCGATGCGCCACGACCCCGCCGACCCCGAGTGGGTCGGTCGCGACCGGTTCGTGCTGTCCGCGGGCCACTCG
TCGCTGACGATCTACCTGCAGCTGTTCCTCGCGGGCTACGGCCTGGAGATGGACGACATCGCGGCGCTGCGGACGTGGGG
CTCGAAGACCCCGGGCCACCCGGAGTACGGCCACACCGCGGGCGTCGAGATCACGACGGGCCCGCTGGGCCAGGGCCTGG
CCTCCGCCGTCGGCATGGCCTTCGCCGCCCGCCGCGAGCGCGGTCTGCTCGACCCGAACGCGGCGCCGGGCACGTCGCCG
TTCGACCACCACATCTACGTCATCGCCTCCGACGGCGACCTGCAGGAGGGCGTGACGTCCGAGGCGTCGTCGCTCGCCGG
CCACCAGCAGCTCGGCAACCTCATCGTGATCTGGGACGACAACAAGATCTCGATCGAGGACGACACCGACATCGCGTTCA
CCGAGGACGTGCTCGCGCGCTACGAGGCGTACGGCTGGCACACCCAGCGCGTCGACTGGACGCAGGGCGGGACCGGCTAC
GCCGAGGACGTCGACGCGCTCGCCGCGGCGATCGCGGCCGCCAAGGCCGAGACGGGCCGGCCGTCCATCATCGACCTGCG
CACGATCATCGGCTGGCCGTCGCCGACCAAGCAGAACACCGGCGCCATCCACGGCTCGGCCATGGGCGCCGACGAGATCG
CGGGCCTCAAGACGGAGCTCGGCCTCGACCCGAGCGCGTCCTTCGCGATCGACGACGAGGTGCTCGCGTACACGCGGTCC
GTCGCCGAGCGCCAGGCCGAGCAGCGCCGCGCGTGGGAGACCGCGTTCGAGGCGTGGCAGACCGCCAACCCGTCGGGCGC
GGCGCTGCTGGAGCGCCTGCGCGCCCGCGAGCTGCCCGAGGGCTGGACCGACGCGCTGCCCGAGTTCGAGGCGTCCGTCA
AGGGCGTCGCGACGCGTGCGGCGTCGGGCAAGGTGCTCACCGCGCTCAAGGACGTGCTGCCCGAGCTGTGGGGCGGCTCG
GCCGACCTCGCCGGCTCGAACAACACGACGATGGACGGCGAGCCGTCGTTCGTCCCGGTCGAGCACGCGACCAGGAAGTT
CCCGGGCCACGAGTACGGCCGCACGCTGCACTTCGGCATCCGCGAGCACGGCATGGGCGCGATCCTCAACGGCATCGTGC
TGCACGGCCTGACCCGCCCCTACGGCGGCACGTTCCTGCAGTTCTCCGACTACATGCGCGCCGCCGTCCGCCTGGCCGCG
CTCATGGAGATCCCGACGACGTTCGTGTGGACGCACGACTCGATCGGCCTCGGCGAGGACGGACCGACCCACCAGCCCGT
CGAGCACCTGGCCGCGCTGCGCGCGATCCCGAACCTCGACGTCGTGCGCCCGGCCGACGCGAACGAGACCGCCTGGGCGT
GGCGCGGGGTCCTGGAGAACACGAAGAACCCGGCCGGCCTCATCCTGACCCGCCAGAACGTCCCGACGTTCCCGCGCGGC
ACGGACGGCTACGCGAGCGCCGAGGGCACCCTCAAGGGCGCGTACACGCTGCTCGACGCCGTCAACGAGGAGACGGGCGC
GCCGGACGTCATCCTCGTCGGCACCGGGTCCGAGGTCCAGCTCGCCGTCGAGGCGCGCGAGCTGCTCGCCGCCGACGGCA
TCGCCGCGCGCGTCGTGTCGATGCCGAGCCGCGAGTGGTTCGACCGCCAGGACGCCGCGTACCGCGAGTCGGTGCTGCCG
GCCGAGGTCAAGGCGCGCGTCTCGGTCGAGGCGGGCGTCGCCCAGGGCTGGCGCGACGTCGTCGGCGACGCCGGCCGCAC
GGTGTCGCTCGAGCACTACGGCGCCTCGGCCGACTACAAGACGCTCTACCGCGAGTTCGGCATCACGGCGCAGGCCGTCG
CCGACGCCGCGCGCGAGTCGCTGGCCGTCGTCCGCGGCGAGGCCTGA

Protein sequence :
MNAFDPALTPLEWTELDDRAVKTIKALAADAVEKVGNGHPGTAISLAPAAYLLFQKAMRHDPADPEWVGRDRFVLSAGHS
SLTIYLQLFLAGYGLEMDDIAALRTWGSKTPGHPEYGHTAGVEITTGPLGQGLASAVGMAFAARRERGLLDPNAAPGTSP
FDHHIYVIASDGDLQEGVTSEASSLAGHQQLGNLIVIWDDNKISIEDDTDIAFTEDVLARYEAYGWHTQRVDWTQGGTGY
AEDVDALAAAIAAAKAETGRPSIIDLRTIIGWPSPTKQNTGAIHGSAMGADEIAGLKTELGLDPSASFAIDDEVLAYTRS
VAERQAEQRRAWETAFEAWQTANPSGAALLERLRARELPEGWTDALPEFEASVKGVATRAASGKVLTALKDVLPELWGGS
ADLAGSNNTTMDGEPSFVPVEHATRKFPGHEYGRTLHFGIREHGMGAILNGIVLHGLTRPYGGTFLQFSDYMRAAVRLAA
LMEIPTTFVWTHDSIGLGEDGPTHQPVEHLAALRAIPNLDVVRPADANETAWAWRGVLENTKNPAGLILTRQNVPTFPRG
TDGYASAEGTLKGAYTLLDAVNEETGAPDVILVGTGSEVQLAVEARELLAADGIAARVVSMPSREWFDRQDAAYRESVLP
AEVKARVSVEAGVAQGWRDVVGDAGRTVSLEHYGASADYKTLYREFGITAQAVADAARESLAVVRGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 7e-118 44
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-113 44